Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5283 ATGGGTTCTGTATCTGGAGAAGATGACAAGCTCCACCTTGATTTCGACGATGAGGAAGCTGCTCCCTTCAGCTCTTCTTCACCATCTTCTTCTGTCTCCAAAGTTCATCCTTTCAATTTCGAGACCGCAGTTGCTGCTTCATCTCTGTTTAAATCTCTTCGGGCAAGACGTGTCAGCAGGAGTGTGTATCTTGTTTTGATTAAAGCCAGGATCAACGTCTTGCTACCCTTTGGTCCATTGGCCATTTTGCTACATTATATCACTGGAAAGCATGGATGGGTCTTCTTGTTCACCTTATTAGGTATTGCTCCTTTGGCAGAACGTTTGGGTTATGCTACTGAGCAGCTTGCGTTGTACACAGGACCCACAGTTGGGGGTCTGCTTAATGCCACGTTTGGCAATGCAACTGAAATGATTATATCAATTTATGCTTTGAAAAGCGGTATGATTAGGGTTGTTCAGCAAACTTTACTTGGTTCAATCTTGTCAAATATGCTTCTAGTCCTTGGCTGTGCATTCTTTACCGGTGGGATTGTCCACTACCAAAAAGTTCAGGTTTTCAATAAGGCAACTGCTATTGTCAATTCTGGGTTGTTGTTGATGGCTGTAATGGGATTATTATTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATCTTGGGAAGTCCGTATTATCTCTATCAAGATTTAGCAGTTGCATAATGTTAGTGGCATATGCAAGCTACCTTTTCTTTCAACTTAAAAGTCAGCACAGTTCTTATAATCCTGTGGATGAGGAAGGAGATAAAAGCGAAGATTGTGAAGAGGAGGAAGAACTTGAATTAACTCAATGGGAAGCAATAATCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGGTACCTTGTGGATGCCATACAGGGAGCATCTGAGTCAATGAATATGTCAGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCTGTGAAGGATAAGCTTGATATCACAATTGGAGTTGCCATTGGATCATCCACACAAATATCTATGTTTGTGATCCCCTTTTGTGTGGTTGTTGGGTGGTGCATGGGAAAAGAAATGGATTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATAACCGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTCATTCTATGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGATGACTAG 1305 0.4123 MGSVSGEDDKLHLDFDDEEAAPFSSSSPSSSVSKVHPFNFETAVAASSLFKSLRARRVSRSVYLVLIKARINVLLPFGPLAILLHYITGKHGWVFLFTLLGIAPLAERLGYATEQLALYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQTLLGSILSNMLLVLGCAFFTGGIVHYQKVQVFNKATAIVNSGLLLMAVMGLLFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLKSQHSSYNPVDEEGDKSEDCEEEEELELTQWEAIIWLAILTAWVSILSGYLVDAIQGASESMNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSGDD* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5283 434 Pfam Sodium/calcium exchanger protein 93 248 IPR004837 GO:0016021|GO:0055085
Lja3g5283 434 Pfam Sodium/calcium exchanger protein 282 421 IPR004837 GO:0016021|GO:0055085
Lja3g5283 434 TIGRFAM cax: calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
Lja3g5283 434 Gene3D - 270 425 IPR044880 -
Lja3g5283 434 Gene3D - 122 257 IPR044880 -
Lja3g5283 434 PANTHER VACUOLAR CATION/PROTON EXCHANGER 7 431 - -
Lja3g5283 434 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lja3g5283 434 TIGRFAM caca2: calcium/proton exchanger 65 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5283 Lja-Chr3 95083764 95091386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5283 56 429 Antiporters AT3G13320 76.000 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5283 K07300 - gmx:100806000 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5283 3 95083764 95091386 Lja3g5283 3 95083764 95091386 ECH