Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5275 ATGATTTTGATTGTTCCCTTACAACTGAGAGCAGTACAGAGCAGTGTTGCTATTGCAATGGACACCCTTCAACTTGTTCAGACACGACCATATGCCACTTCCCTTGCTTTGGGTGCTGTGTTTCTCTTCTTCTTGTTTTGGTTCACCACCAAACGTTCCAACCTTCCCACAGTACCAGCGGTTCCAGGGCTTCCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTATAATACATTCATCCAAATGGCTGAGAAATATGGGCCAATTTATTCAATCAGAACTGGTGCTTCCACCCTCATTGTTCTCAACTCTGCCCAGCTTGCCAAGGAGGCAATGGTGACCAGATATTCATCAATTTCGTCAAGGAAGCTATCAAGTGCGCTACATATTTTGTCTTCCAATAAATGTATGGTTGCTACGAGTGACTACAATGAATTTCACAAAATGAGTAAAAGACATATCCTTGCAAACGTTCTCGGAGCCAATGCACAGAAGCGACATCGTCTCCATAGAGAAGTGATGATGGAAAACCTTTCGAGGCAGTTTAATGAACATGTCAAGACCACCTCTGATTTGGCTGTTAATTTTAGGGAAATATTTGCGTCTGAACTTTTTGGACTAGCAATGAAGCAAGCTCTTGGAAGTGATGTAGAATCCATTTATGTGGAGGAGCTTCGGAGTACATTGTCAAAAAATGATATATACAAGATTCTCGTGCTTGATATAATGGAGGGTGCTATTGAGGTAGATTGGCGAGATTTCTTTCCATACCTTAAATGGATTCCGAATAAGGGCATAGAGATGAAGATTCAGAAATGGCATGATCGCAGAAAAGCTGTCATGAAGGCCTTGATGAATGAGCAGAGAAAGCGATTGGCCTCGGGAAAGGAAGAAAATTGTTATTTTGACTACCTGTTGTCTCAAGCTAAAGAATTGACTGAAGAACAACTTTACATGTTGATATGGGAGACCATTCTTGAAACAGCTGATACAACCTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGATAAAAATCGCCAGGAGCGTTTGTATGAGGAGCTCCAAAATGTATTTGAACATGAAAAATTTATAGAAGGCCAATTAGCTAAGCTACCTTATTTAGGTGCTGTGTTCCATGAAACTTTAAGGAAGCATAGTCCTGTTCCAATTGTCCCACTAAGATATGCTCATGAAGATACCGAGTTGGGTGGATATCATATTCCTAAAGGAAGCGAGATTGCAATAAATATATATGGATGCAACATGGACAAGAAGCAGTGGGAAAATCCTCAGCAGTGGTCACCTGAGAGATTTCTTGATGAGAAATATGACAACGCGGATTTTTACAAGACAATGGCCTTCGGAGCAGGGAAGAGGGTGTGTGCGGGGTCTCTTCAGGCCATCACAATAGCTTGCACAACAATTGGCACATTGGTTCAGGAATTCGAGTGGAAGCTCGGACAAGGGGAGGAGGAAGAGAGTGTGGATACAACGGGCCTTACCACCCACAGGTTCCATCCTTTGCAAGTCAAACTCAAGCCAAGAAAATAA 1569 0.42 MILIVPLQLRAVQSSVAIAMDTLQLVQTRPYATSLALGAVFLFFLFWFTTKRSNLPTVPAVPGLPVIGNLLQLKEKKPYNTFIQMAEKYGPIYSIRTGASTLIVLNSAQLAKEAMVTRYSSISSRKLSSALHILSSNKCMVATSDYNEFHKMSKRHILANVLGANAQKRHRLHREVMMENLSRQFNEHVKTTSDLAVNFREIFASELFGLAMKQALGSDVESIYVEELRSTLSKNDIYKILVLDIMEGAIEVDWRDFFPYLKWIPNKGIEMKIQKWHDRRKAVMKALMNEQRKRLASGKEENCYFDYLLSQAKELTEEQLYMLIWETILETADTTLVTTEWAMYELAKDKNRQERLYEELQNVFEHEKFIEGQLAKLPYLGAVFHETLRKHSPVPIVPLRYAHEDTELGGYHIPKGSEIAINIYGCNMDKKQWENPQQWSPERFLDEKYDNADFYKTMAFGAGKRVCAGSLQAITIACTTIGTLVQEFEWKLGQGEEEESVDTTGLTTHRFHPLQVKLKPRK* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5275 522 SUPERFAMILY Cytochrome P450 51 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 Coils Coil 343 363 - -
Lja3g5275 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Lja3g5275 522 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 31 522 - -
Lja3g5275 522 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 31 522 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Lja3g5275 522 Pfam Cytochrome P450 60 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5275 522 Gene3D Cytochrome P450 49 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5275 Lja-Chr3 94997718 95001251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5275 53 522 Cytochrome P450 AT5G25900 63.694 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5275 K04122 - gmx:100802970 775.778