Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5274 ATGACAGCTCGAGCATTGACTTCTTTTTTTATGAAGTTGAGGGCAAAAGCCCAAGCTCGAGCATATTCTTTTATTTTTTATTTTTATGGCTATTCGGTTCCAGGGCTTCCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACATTCACTCAGATGGCTGAGAAATATGGGCCAATTTATTCAATCAGAACTGGTGCTTTCACCCTCATCGTTCTCAACTCTGCTCAAGTTGCCAAGGAGGCAATGGTGACCAGATATTCATCAATTTCTTCAAGGAAGCTATCAAGTGCGCTACAGATTCTGACTTCCAATAAATGTTTGGTTGCTATGAGTGACTACAATGAATTTCACAAAAAGATTAAAAGACATATTCTTGTAAACGTTCTGGGAGCCAATGCACAGAAGCGACATCGTCTCCACAGAGAAGTGATGATGGAAAACCTTTTGAGGAAGTTTAATGAACATGTGAAGACCACCTCTGATTTGGCTGTTAATTTTAGGGAAATATTTGCATCTGAACTTTTTGGCCTATCAATGAAACAAGCTCTGGGAAGTGATGTAGAATCCATTTATGTGGAGGAGCTTGGGAGTACATTGTCAAGAGATGACATATACAAGATTCTCGTGTCTGATATAATGGAGGGTGCTCTTGAGGTGGATTGGCGAGATTTCTTTCCATACCTTAAATGGATTCCGAATAAGGGCATAGAGATGAAGATTCAGAAATTGCATGATCGCAGAAAAGCTGTCATGAAGGCCTTGATGAATGAGCAGAGGAAGCGATTGGCCTCGGGAAAGGAAGAATATTGTTATTTTGACTACCTGTTGTCTGAAGCTAAAGAAATGACTGAAGAACAACTTTATATGCTGATATGGGAGACCATTCTTGAAACAGCTGATACAACCTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGAGAAAAATTTCCAGGAGCGTTTGTATGAGGAGCTCCGAAATGTATGTGGACATGAAAAAATTATAGAAGGACAATTAGCAAAGCTACCTTATTTAGGTGCTGTGTTCCATGAAACTTTAAGGAAGCATAATCCAGTTCCAATTGTCCCACTAAGATATGCTCATGAAGATACCGTGTTGGGTGGATATCATATTCCTGCAGGAAGCGAGATTGCAATAAATATATATGGATGCAACATGGACAAGAAGCAGTGGGAAAATCCTCAGCAGTGGTCACCTGAGAGATTTCTTGATGAGAAATATGACAACGCGGATTTGTACAAGACAATGGCCTTCGGAGCAGGGAAGAGGGTGTGTGCGGGGTCTCTTCAGGCCATGTTGATTGCTTGCACAGCAATTGGCACATTGGTTCAGGAATTCGAGTGGAAGCTCGGACAAGGGGCGGAGGAGGAGCTTGTGGATACAGTGGGCATTACCACCCACAGGCTCCATCCTTTACAAGTCAAACTCAAGCCAAGAAAATAA 1485 0.4148 MTARALTSFFMKLRAKAQARAYSFIFYFYGYSVPGLPVIGNLLQLKEKKPYKTFTQMAEKYGPIYSIRTGAFTLIVLNSAQVAKEAMVTRYSSISSRKLSSALQILTSNKCLVAMSDYNEFHKKIKRHILVNVLGANAQKRHRLHREVMMENLLRKFNEHVKTTSDLAVNFREIFASELFGLSMKQALGSDVESIYVEELGSTLSRDDIYKILVSDIMEGALEVDWRDFFPYLKWIPNKGIEMKIQKLHDRRKAVMKALMNEQRKRLASGKEEYCYFDYLLSEAKEMTEEQLYMLIWETILETADTTLVTTEWAMYELAKEKNFQERLYEELRNVCGHEKIIEGQLAKLPYLGAVFHETLRKHNPVPIVPLRYAHEDTVLGGYHIPAGSEIAINIYGCNMDKKQWENPQQWSPERFLDEKYDNADLYKTMAFGAGKRVCAGSLQAMLIACTAIGTLVQEFEWKLGQGAEEELVDTVGITTHRLHPLQVKLKPRK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5274 494 Gene3D Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja3g5274 494 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 Pfam Cytochrome P450 35 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5274 494 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 31 494 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5274 Lja-Chr3 94985400 94992338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5274 33 494 Cytochrome P450 AT5G25900 64.147 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5274 K04122 - gmx:100802970 778.859