Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5273 ATGGACACGCTTCAACTTGTTCAGACACAACCCTATGCCACTACCCTTGCTTTGGGTGCTGTATTTCTCTTCTTCTTGTTTTGGTTCACCACCAAACGTTCCAAACTTCCCACAGTACCAGCGGTTCCAGGGCTTCCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACATTCACTCAAATGGCTGAGAAATATGGGCCAATTTATTCAATCAGAACTGGTGCTTTCACCCTCATCGTTCTCAACTCTGCTCAAGTTGCCAAGGAGGCAATGGTGACCAAATATTCATCAATTTCTTCGAGGAAGCTATCAAGTGCGCTACAGATTCTGACTTCCAATAAATGTATGGTTGCTATGAGTGACTACAATGAATTTCACAAAATGATTAAAAGACATATTCTTGCAAACGTTCTGGGAGCCAATGCACAGAAGCGACATCGCCTCCATAGAGAAGTGATGATGGAAAACCTTTCGAGGCAGTTTAATGAACATGTGAAGACAACCTATGATTTGGCTGTGAATTTTAGGGAAATATTTGCATCTGAACTTTTTGGACTATCAATGAAGCAAGCTCTGGGAAGTAATGTAGAATCCATTTATGTAGAGGAGCTTGGGAGTACATTGTCAAGAGATGATGTATACAAGATTCTCGTGCTTGATATAATGGAGGGTGCTATTGAGGTGGATTGGCGAGATTTCTTTCCATACCTTAAATGGATTCCAAATAAGAGCATAGAGATGAAGATTCAGAAATTGTATGATCGCAGAAAGGCTGTCATGAAGGCCTTGATGAATGAGCAGAGGAAGCGATTGGCCTCGGGAAAGGAAGAAAATTGTTATTTTGACTACCTGTTATCTGAAGCTAAAGAGCTGACTGAAGATCAACTTTCCATGCTGATATGGGAGACAATTATTGAGACAGCTGATACAACCTTAGTTACAACAGAATGGGCTATTTATGAACTGGCTAAAGACAAAAATCGCCAGGAGCGTTTGTATGAGGAGCTCCGAAATGTATGTGGACATGAAAAAATTACAGAAGGCCAATTAGCTAAGCTACCTTATTTAGGTGCTGTGTTCCATGAAACTTTAAGGAAGCATAGTCCTGCTCCAATTGTTCCAATAAGATATGCTCATGAAGATACCGAGTTGGGTGGATATCATATTCCTGCAGGAAGCGAGATTGCAATAAATATATATGGATGCAACATGGACAAGGAACAGTGGGAAAATCCTCAGCAGTGGGCACCTGAGAGATTTCTTGATGAGAAATATGACAACGCGGATTTGTACAAGACAATGGCCTTCGGAGCAGGGAAGAGGGTGTGTGCGGGGTCTCTTCAGGCCATGTTGATTGCTTGCACAGCAATTGGCACATTGGTTCAGGAATTCGAGTGGAAGCTCAGACAAGGGGAGGAGGAAGAAAATGTGGATACAGTGGGCCTCACCACCCACAAGCTCCACCCCTTGCAAGTCAAACTCAAGCCAAGAAAACAAGTAAGAAGATGA 1524 0.4245 MDTLQLVQTQPYATTLALGAVFLFFLFWFTTKRSKLPTVPAVPGLPVIGNLLQLKEKKPYKTFTQMAEKYGPIYSIRTGAFTLIVLNSAQVAKEAMVTKYSSISSRKLSSALQILTSNKCMVAMSDYNEFHKMIKRHILANVLGANAQKRHRLHREVMMENLSRQFNEHVKTTYDLAVNFREIFASELFGLSMKQALGSNVESIYVEELGSTLSRDDVYKILVLDIMEGAIEVDWRDFFPYLKWIPNKSIEMKIQKLYDRRKAVMKALMNEQRKRLASGKEENCYFDYLLSEAKELTEDQLSMLIWETIIETADTTLVTTEWAIYELAKDKNRQERLYEELRNVCGHEKITEGQLAKLPYLGAVFHETLRKHSPAPIVPIRYAHEDTELGGYHIPAGSEIAINIYGCNMDKEQWENPQQWAPERFLDEKYDNADLYKTMAFGAGKRVCAGSLQAMLIACTAIGTLVQEFEWKLRQGEEEENVDTVGLTTHKLHPLQVKLKPRKQVRR* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5273 507 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 13 504 - -
Lja3g5273 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lja3g5273 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 Pfam Cytochrome P450 41 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 Gene3D Cytochrome P450 30 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5273 507 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 13 504 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Lja3g5273 507 SUPERFAMILY Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5273 Lja-Chr3 94968624 94972324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5273 34 503 Cytochrome P450 AT5G25900 65.605 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5273 K04122 - gmx:100802970 800.816