Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5272 ATGGACACCCTTCAACTTGTTCAGACACAGCCTTATGCCACTACCCTTGCTTTGGGTGTTGTGCTTCTCTTCTTAGTGTTCTGGTTCACTCACAAACGTTCCAAACTTCCCTCAGTACCAACGGTTCCTGGGCTTCCAGTGATAGGGAATCTGCTGCAATTGAAGGAGAAGAAACCTTACAAGACATTCACTCAAATGGCTGAGAAATATGGGCCAATTTATTCAATCAGAACTGGTGCTTCCACCCTCATTGTTCTCAACTCTGTCCAGCTTGCCAAAGAGGCAATGGTAACCAGATATTCATCAATTTCATCGAGGAAGCTATCAAGTGCACTGCAGACTCTGACTTCCAATAAATGTTTGGTTGCTATGAGTGACTACAATGAATTTCACAAAATGGTTAAAAAACATATTCTTGCAAATCTTCTGGGAGCCAATGCACAGAAGCGACATCGTCTCCACAGACAAGTGATGATGGAAAACCTTTCGAGGCAGTTTAATGAACATGCGAAGTCCTCCGATTTGGCTGTTAATTTTAGGGAAATTTTTGCATCTGAACTTTTTGGACTAGCAATGAAGCAAGCTTTGGGAAGTGATGTAGAATCCATTCATGTGGAGGAGCTTGGTAGAAAATTGTCTAGAGATGACATTTATAAGATTCTAGTGCTTGATTTAATGGAGGGTGCAATTCAGGTGGATTGGAGAGATTTCTTTCCATACCTTAAATGGATTCCAAATAAGAGCTTGGAGATGAAAATTCAAAAATTGTGTGATCGTAGAAAAGCTGTCATGAAGGCCTTGATGAATGAGCAGAGGAAACGATTGGCCTCGGGAAAGGAAGAGAATTGTTATTTTGACTACCTGTTATCTGAAGCTAAAGAACTAACTGAAGAACAAATTTCCATGCTGATATGGGAGACCATTATTGAGACAGCTGATACAACCTTAGTTACAACAGAATGGGCTATGTATGAACTTGCTAAAGACAAAAGTCGCCAGGACCGTTTGTATGAGGAGCTCCAAAATGTGTGTGGACATAAAAAAATTACAGAAGACCAATTAGCTAAGCTACCTTATTTAGGGGCTGTGTTCCATGAAACTTTAAGGAAGCATAGTCCAAGTCCAACAGTACCACCAAGATATGCTCATGAAGATACCGAGTTGGGTGGATATCATATTCCTGCAGGAAGCGAGATTGCAATAAATATATATGGATGCAACATGGACGAGAAGCAGTGGGAAAATCCTCAGCAGTGGACGCCTGAGAGATTTCTTGATGAGAAATATGACAACACGGATTTGTACAAGACAATGGCATTTGGAGCAGGAAAGAGGGTGTGTGCAGGGTCTCTTCAGGCCATGTTGATTGCTTGCACAGCAATTGGCACATTGGTTCAGGAATTCGAGTGGAAGCTCGGACAAGTGGAGGTGGAAGAGAATGTGGATACAGTGGGCCTTACCACCCACAGGCTCCATCCTTTGCAAGTCAAACTCAAGCAAAGAAATTAA 1509 0.4195 MDTLQLVQTQPYATTLALGVVLLFLVFWFTHKRSKLPSVPTVPGLPVIGNLLQLKEKKPYKTFTQMAEKYGPIYSIRTGASTLIVLNSVQLAKEAMVTRYSSISSRKLSSALQTLTSNKCLVAMSDYNEFHKMVKKHILANLLGANAQKRHRLHRQVMMENLSRQFNEHAKSSDLAVNFREIFASELFGLAMKQALGSDVESIHVEELGRKLSRDDIYKILVLDLMEGAIQVDWRDFFPYLKWIPNKSLEMKIQKLCDRRKAVMKALMNEQRKRLASGKEENCYFDYLLSEAKELTEEQISMLIWETIIETADTTLVTTEWAMYELAKDKSRQDRLYEELQNVCGHKKITEDQLAKLPYLGAVFHETLRKHSPSPTVPPRYAHEDTELGGYHIPAGSEIAINIYGCNMDEKQWENPQQWTPERFLDEKYDNTDLYKTMAFGAGKRVCAGSLQAMLIACTAIGTLVQEFEWKLGQVEVEENVDTVGLTTHRLHPLQVKLKQRN* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5272 502 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 14 502 - -
Lja3g5272 502 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 14 502 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Lja3g5272 502 Pfam Cytochrome P450 42 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 Gene3D Cytochrome P450 30 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 SUPERFAMILY Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lja3g5272 502 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5272 502 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5272 Lja-Chr3 94963443 94967032 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5272 34 501 Cytochrome P450 AT5G25900 66.170 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5272 K04122 - gmx:100802970 778.474