Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5270 ATGATGAATCTTGAACCTTTTGTTGCAGTTGTCCTTGCTTTGTACTTGCTGAAATTTTTGTACTCAGTTCTTTGGGTCCCATGGAAAATCCAGTGCCACTTTCAGAAGCAAGGGATAGATGGCCCTGGCTACCGTCCGATTTTCGGGAACATGTCTGAGACTCGACGGTTGCATATAGAAGCTAAATCAGAGGCAACCCCGTTTGAGCATGACATCTTAAAACGTGTGCTTCCATTCTACCACAGATGGAGTTGCATGTATGGTAAAACATTCCTTTGCTGGTTTGGGTCAACGCCCCGTTTGGCTATATCAGACCCTGACATGATCAAGGAGGTGTTGGTGAATAAGGGTGGGGAGTATGAAAGAGTTCCCTATAACCCATTGGCTAAGTTGCTTTTTGGAAAGGGGCTTGTGGGGTTGAAGGGTGATCAATGGACAATTCACAGAAGGATGATAAGAATGGCCCTCAACATGGAGCTTGTTAAGGGATGGGTGCCAGATATTGTGGAGAGTGTGACAAAGATGCTGGAGAAATGGGAAGATCAAAGAGGAGAACAAGATGAAGTTGAGATAGATGTGCACAGAGAGTTCCATGACCTTTCAGCAGAGTTTATATCAAGGACTGCTTTTGGCAGCAGTTATGAAGAGGGCAAGCATATTTTCAAGTTACAGGACCAGCAATTGCATCTTTTCTTACAGGCAAACATGAATGTCTATATCCCTGGATTTAGATATTTGCCGACTAAGAAGAATAGGGGTAGGTGGAGACTTGATAAAGAAACACATGAATCAGTTCGCAAGCTGATTGAGACCAAGAGAAACATGAGGGAAAGAAATTTACTAAGTTCATTGATGAGTTCCTACAAGAATGAAGTTGGTGGAGAAGATAAGTTAGGGGACGAAGAAATTATAGATGAATGCAAATCCATTTACTTTGGTGGAAAAGAGACATCAGCTAATTTATTGACATGGGCCCTTCTGCTATTAGCAAAACATCAGGAATGGCAGAGTAAAGCGCGTGAAGAAGTTCTCCGAGTCATTGGACACGATCCACTTCTGGTTGCAGACAGTTTAAATGACCTTAAGATTGTTAGCATGATAATTAATGAAACACTTCGGCTCTATACGCCGGCTGCAATGTTGATGAGGCGAACCACTAAAAATGTGAAGTTAGGGAGCATTGAAGTCCCTGCTAAGACTCAACTCATCATGGCATTGACTTCTCTGCATCATGACAGTGAAATCTGGGGAGAAGATTGTCATAAGTTTAATCCAATGAGATTTAGCGAACCTCAGAAACATTTAGCCGCATTCTTTGCTTTTGGATTAGGCCCTCGAATCTGTGTTGGGAAAAATTTGGCAATAGCTGAGGCAAAGATTACTCTTGCTTTGATCATTCAGCGATATACTTTTATGGTATCTCCAAGTTATAGACATGCTCCTACACTAGTTATAAGTGTGCAGCCTGAATATGGTGCACAAATCCTCTTCAGAAGGATTTCTTATTGA 1509 0.4195 MMNLEPFVAVVLALYLLKFLYSVLWVPWKIQCHFQKQGIDGPGYRPIFGNMSETRRLHIEAKSEATPFEHDILKRVLPFYHRWSCMYGKTFLCWFGSTPRLAISDPDMIKEVLVNKGGEYERVPYNPLAKLLFGKGLVGLKGDQWTIHRRMIRMALNMELVKGWVPDIVESVTKMLEKWEDQRGEQDEVEIDVHREFHDLSAEFISRTAFGSSYEEGKHIFKLQDQQLHLFLQANMNVYIPGFRYLPTKKNRGRWRLDKETHESVRKLIETKRNMRERNLLSSLMSSYKNEVGGEDKLGDEEIIDECKSIYFGGKETSANLLTWALLLLAKHQEWQSKAREEVLRVIGHDPLLVADSLNDLKIVSMIINETLRLYTPAAMLMRRTTKNVKLGSIEVPAKTQLIMALTSLHHDSEIWGEDCHKFNPMRFSEPQKHLAAFFAFGLGPRICVGKNLAIAEAKITLALIIQRYTFMVSPSYRHAPTLVISVQPEYGAQILFRRISY* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5270 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lja3g5270 502 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 Pfam Cytochrome P450 79 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 495 - -
Lja3g5270 502 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g5270 502 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 9 495 - -
Lja3g5270 502 Gene3D Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5270 Lja-Chr3 94945484 94948159 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5270 21 501 Cytochrome P450 AT1G75130 53.086 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5270 - - gmx:100775195 746.503