Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5269 ATGTTGATCAATGTGAAAGCCTCGACGATGGTGCGTCCGGCGGAGGAGACACCGCGTACGGCGTTATGGAACTCCAACGTGGATTTGGTGGTGCCGAACTTTCACACGCCGAGTGTCTACTTCTACAGACCAAACGGCGCCTCCAACTTCTTCGACGCGGTGGTTCTGAAGGAGGCTCTGAGCAAGGCACTTGTTGTCTTTTACCCGATGGCTGGCCGCCTCCGCCGTGACGACGACGGTCGCGTCGAGATTTATTGCGACGGCCAAGGGGTGCTCTTTGTTGAGGCTGATATCGCCGCATCCGTCGATGACTTTGGTGATTTCGCTCCCACGCTTCAGCTTCGGCAGCTTATCCCCACCGTCGATTACTCTGCCGGCATCGAAACGTACCCGCTCTTGGTGTTGCAGGTAACACATTTTAAATGTGGAGGAGTCTCATTAGGAGTTGGCATGCAGCACCATGTAGCAGATGGAGCCTCTGGTCTCCACTTTATCAATTCATGGTCAGATGTCGCTCGTGGCCTTGACATTTCAACCCCACCATTCATTGACCGAACACTACTCCGTGCTCGTGATCCACCTCAACCAGTGTTTGATCACATTGAATACAAGCCCCCACCAGCCTTGAAGAGTAGTACTACTCCCCTGCAACCAGCAAAACCAGGCTCAGACAATTCTGCAGCGGTCTCTATCTTCAAATTGACCCGTGACCAGTTGAACATCCTCAAGGGTAAGTCCAGAGAAAATGGCAACACCATCAACTACAGCTCTTACGAGATGTTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGATCACTTGATCCCAATGACCAAGAAACTAAGTTGTACATTGCAACTGATGGCAGGGCAAGGCTGCAACCTCCCCTGCCACAAGGGTACTTTGGCAATGTGATCTTCACAGCCACGCCTATTGCGATGGCTGGTGATCTCATGTCAAAGCCAATATGGTATGCTGCAAGCAGAATCCATGATGCATTGTTGAGAATGGACAATGAGTATTTGAGATCAGCTCTGGATTTTCTTGAGCTGCAACCTGATCTTAGAGCTCTGGTTCGTGGGGCACACACTTTCAGGTGCCCGAATCTTGGGATCACTAGCTGGGTAAGACTACCAATTCATGATGCTGATTTTGGTTGGGGAAGACCAATTTTCATGGGACCTGGTGGGATTGCATATGAGGGGCTATCATTCATAATTCCAAGCCCTGTAAATGATGGGAGCTTATCAGTGGCAATTGCTCTACAGCCAGAGCAGATGAAAGTGTTTCAGGAATTGTTTTATGATATTTGA 1317 0.4989 MLINVKASTMVRPAEETPRTALWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAVVLKEALSKALVVFYPMAGRLRRDDDGRVEIYCDGQGVLFVEADIAASVDDFGDFAPTLQLRQLIPTVDYSAGIETYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINSWSDVARGLDISTPPFIDRTLLRARDPPQPVFDHIEYKPPPALKSSTTPLQPAKPGSDNSAAVSIFKLTRDQLNILKGKSRENGNTINYSSYEMLAGHVWRSVCKARSLDPNDQETKLYIATDGRARLQPPLPQGYFGNVIFTATPIAMAGDLMSKPIWYAASRIHDALLRMDNEYLRSALDFLELQPDLRALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSPVNDGSLSVAIALQPEQMKVFQELFYDI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5269 438 Pfam Transferase family 3 436 - -
Lja3g5269 438 Gene3D - 1 205 IPR023213 -
Lja3g5269 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 437 - -
Lja3g5269 438 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 437 - -
Lja3g5269 438 Gene3D - 219 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5269 Lja-Chr3 94935380 94939246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5269 1 438 Monolignol Biosynthesis Gene Families AT5G48930 76.712 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5269 K13065 - gmx:100801923 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5269 3 94935380 94939246 Lja3g5269 3 94935380 94939246 ECH
Lja3g5269 3 94935380 94939246 Lja3g2228 3 26520285 26526457 PCT