Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5267 ATGGCGGATCTCAAAGAGCGGCTACTTCCGCCAAAACCTGCATCAGCTTTTAACCTTAGAGAGGTTTCCAACCGGCCATCTGCCTCTGGAAGGCAAACCTTTCAAGGAGTGGATGTTCTGGGGGTAAAGAAGCGAGGCCAAGGTATCCGGTCATGGATTCGTGTTGACACAGCTGGAAATTCTCAGGCGATTGAAGTAGACAAGTTTACTATGATGAGACGTTGTGACCTACCTGCACGTGATCTTCGCCTACTCGATCCTTTGTTTGTCTACCCATCAACAATCCTTGGTAGGGAAAAAGCCATTGTTGTGAATCTAGAGCAGATACGGTGTATTATTACAGCAGATGAGGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCATTATGTGATGGAGCTACAGCGGCGGTTGACGACAACTGGGGCGGGTGAGGTCTGGCAATCAGACGATTCTGACATGAACAGAAGGAGAGGAGGTAGTAGGAATTTTGAAAATGCATTTAGCAACAGTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCTGCATGCACATTTCTTGATTCCCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCATTGCTAGATGAACTGACATCAAAGATCAGTACTCTAAATTTGGAGCGTGTTCGTCGGTTGAAAAGCAGACTTGTTGCCCTGACTAGGAGGGTTCAGAAGGTCAGAGACGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGGCGGAGTTGTCATTCTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGACGGTGCATCCGTTTCTGCTCCAGTCTCTCCTGTTTCATCACCTCCTGATTCTCGGAGGCTTGAAAAGTGCCTGAGCATTGCGAGGAGTCGACATGAGAGCATGAGGAGTAGTGAAAGTGCTACAGAAAATATAGAAGAGCTTGAGATGTTATTAGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGCTGAAAGAATACATTGATGACACGGAAGATTTCATCAACATTCAACTGGATAATGTTCGTAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTAGCCATCTTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTCCATTATTTGATGTCCCTTCTGCATTCCAGTGGGTCCTCATAATAACAGGAGTTTGTGGAGTCTTCATATTTTCTGCATTTGTGTGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAG 1335 0.439 MADLKERLLPPKPASAFNLREVSNRPSASGRQTFQGVDVLGVKKRGQGIRSWIRVDTAGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTTTGAGEVWQSDDSDMNRRRGGSRNFENAFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRAELSFYGDQSMVGYKSVDGASVSAPVSPVSSPPDSRRLEKCLSIARSRHESMRSSESATENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPLFDVPSAFQWVLIITGVCGVFIFSAFVWFFKYRRLMPL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5267 444 Gene3D Magnesium transport protein CorA, transmembrane region 382 442 - -
Lja3g5267 444 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 444 - -
Lja3g5267 444 Gene3D - 39 123 - -
Lja3g5267 444 CDD Mrs2_Mfm1p-like 52 441 IPR039204 -
Lja3g5267 444 Coils Coil 225 252 - -
Lja3g5267 444 Gene3D Magnesium transport protein CorA, transmembrane region 150 375 - -
Lja3g5267 444 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 444 IPR039204 -
Lja3g5267 444 Pfam CorA-like Mg2+ transporter protein 327 433 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja3g5267 444 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 381 434 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5267 Lja-Chr3 94912555 94917607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5267 1 444 MRS2 Gene Family AT1G16010 86.067 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5267 K16075 - gmx:100801387 782.326