Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5229 ATGCCCAAGTTGGTTCTAAAAGCTGGGAGCAGACCTCCATGGGTGGGTCTTGCAGCTGCAGTTTGGGTTCAAATAGCTGCTGGCAATGTCTACAACTTTCCCCTCTACTCTTCTGCTCTCAAATCCGTGTTGGGTCTCAACCAGCAGCAGGTGTCTTTTCTCGGAGTGGCTAATGATGTTGGGGAGAGTGTGAGCCTGCTTCCTGGTCTTGCTAGCAATAAGTTCCCACCTTGGGCTTTGCTTCTTGTTGGTTCTGTTCTTTCTTTCTTGGGTTATGGCCTTATCTGGCTTGCTGTTACCCAAACTGTTTCCAGCCTTCCCTATGTGGTGCTATGGCTCGCTCTTGCTGTTGCCACTAACAGCGGTGCATGGTTTGGCACGGCCGTGCTTGTTACCAACATGAGGAACTTTCCTCTCAGTAGAGGCACCATCTCTGGCATTCTCAAAGGTTATGTGGGGATTAGTGCTGCAGTGTATACATTAATATATAGCACACTGCTTAAAGGGTCTGCTTCTAAATTACTCTTGTTCCTAGCAATCGGGGTCTCTATTGTGTGTTTAGTTATGATGTACTTCATTAGGCCTTGCACTCCTCCTTCAGGAGAAGACTCTTCAGTGCATGTCCATTTTATTTATACCCAAGCTGCAAGTGTTTTACTTGCCTCCTATCTTGTTACAACCACAGTAGCATGTGACATTGTTTCCATAAGTGATTCTGTTTCCTACATCCTAGTTGCCATAATGGTTATACTTCTGATGACTCCCCTTGCAATTCCTGTTAAAATGACACTATTTCCTTCCGATGCAAAGAACAAAGTTCCAACGGTTAGTTCCTCAGATCAGTTAGATGATGTTTCAATGCAGACAAGTCCATTGTTGACACCATCTTCTTCAACTGCATACCTTGAAAGTTTTCATGAAAGTGAGGATACTTCAGATGTTGAGACTCTTATTGCAGAGGGGGAAGGAGCAGTTAGAAAGAAAAGGAGGCCTAAAAGAGGAGATGATTTCAAGTTTTTTGAAGCCTTGGTCAAGGCAGATTTCTGGCTTCTTTGGTTTTCTTACTTTCTTGGAGTAGGCTCAGGAGTAACAGTTCTCAATAATTTAGCTCAAATTGGAGTTGCTTTGGGAGTAGAAGATACCAGCATATTGCTGTCTGTTTTCAGCTTTTGCAACTTTATAGGGCGTCTTGGTGCTGGCATTGTTTCTGAACACTTTGTTAGGTTGGTAACACTGCCAAGGACATTTTGGATGACAAGTACACAAATCATTATGATCATAGCATTTTTACTTTATGCTTCAGCTCTGGATGGCACTCTTTATGCTGCAACGGCTGTGCTTGGGATCTGCTATGGGGTTCAATATTCTATAATGTTTCCAACTGTCTCAGAGCTTTTTGGTTTGAAGCACTTTGGTGTTATTAGTAGCTTCATTATGCTAGGCAATCCGGTTGGTGCCCTTCTTTTCTCTGTTTTCCTTGCTGGCAATGTGTATGACACAGAAGCTGCAAAGCAAGGAAACTCCACCTGCTATGGCGCAGATTGCTTCAGGCTCACCTTTCTTGTTTTGGCTGGTGCCTGTGGACTTGGTACCATCTTGAGCATCATCTTGACAGTTAGAATACGACCGGTATATCAAATGTTGTATGCAGGGGGTTCATTTCGTCTGTCGCGGACTTCAAACCACTGA 1689 0.4387 MPKLVLKAGSRPPWVGLAAAVWVQIAAGNVYNFPLYSSALKSVLGLNQQQVSFLGVANDVGESVSLLPGLASNKFPPWALLLVGSVLSFLGYGLIWLAVTQTVSSLPYVVLWLALAVATNSGAWFGTAVLVTNMRNFPLSRGTISGILKGYVGISAAVYTLIYSTLLKGSASKLLLFLAIGVSIVCLVMMYFIRPCTPPSGEDSSVHVHFIYTQAASVLLASYLVTTTVACDIVSISDSVSYILVAIMVILLMTPLAIPVKMTLFPSDAKNKVPTVSSSDQLDDVSMQTSPLLTPSSSTAYLESFHESEDTSDVETLIAEGEGAVRKKRRPKRGDDFKFFEALVKADFWLLWFSYFLGVGSGVTVLNNLAQIGVALGVEDTSILLSVFSFCNFIGRLGAGIVSEHFVRLVTLPRTFWMTSTQIIMIIAFLLYASALDGTLYAATAVLGICYGVQYSIMFPTVSELFGLKHFGVISSFIMLGNPVGALLFSVFLAGNVYDTEAAKQGNSTCYGADCFRLTFLVLAGACGLGTILSIILTVRIRPVYQMLYAGGSFRLSRTSNH* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5229 562 SUPERFAMILY MFS general substrate transporter 239 543 IPR036259 -
Lja3g5229 562 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 562 - -
Lja3g5229 562 CDD MFS_Mch1p_like 12 531 - -
Lja3g5229 562 Gene3D MFS general substrate transporter like domains 11 204 IPR036259 -
Lja3g5229 562 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 562 - -
Lja3g5229 562 Pfam Nodulin-like 13 260 IPR010658 -
Lja3g5229 562 SUPERFAMILY MFS general substrate transporter 10 198 IPR036259 -
Lja3g5229 562 Gene3D MFS general substrate transporter like domains 344 545 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5229 Lja-Chr3 94538077 94541967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5229 1 561 Nodulin-like Gene Family AT1G80530 60.606 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5229 - - qsu:112016545 827.009