Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5134 ATGAGCGTGGTCGGTTTTGATTTCGGTAACGAGAGCTGCATTGTTGCTGTTGCGAGGCAAAGGGGGATTGATGTTGTGCTCAACGATGAGTCCAAGCGGGAGACCCCGGCGATTGTGTGCTTTGGTGACAAGCAGCGGTTCCTTGGAACAGCTGGGGCATCGTCTACTATGATGAATCCAAAGAATTCGATCTCGCAGCTTAAGAGGTTGATTGGCAGACAGTTTGCTGATCCGGAATTGCAGCGGGATCTGAAGTCGTTGCCTTTTGCTGTCACGGAAGGACCTGATGGATTTCCGTTGATTCACGCACGGTACCTGGGTGAAACTAGAACATTCACACCTACCCAAGTATTTGGAATGATGTTGTCAAATCTTAAAGAAATAGCCCAGAAGAATTTGAATGCAGCTGTTGTTGATTGCTGTATTGGAATTCCGATTTATTTTACTGATCTTCAGAGGAGAGCCGTCTTGGATGCAGCCACTATTGCAGGCTTGCATCCACTTCGCTTGTTCCATGAAACCACTGCAACTGCCTTGGCATATGGAATTTATAAGACTGATCTTCCTGAGAATGATCCGCTGAATGTTGCCTTTGTTGATGTTGGACATGCTAGCATGCAAGTCTGCATTGCTGGATATAAGAAGGGGCAGCTGAAAGTGTTGGCCCATTCTTATGATAGGTCTCTGGGTGGGAGGGACTTTGATGAGGTCCTATTCAATCATTTTGTTGCAAAATTTAAGGAGCAGTACAAGATTGATGTTTTACAGAACGCCAGGGCCTGCCTAAGGCTGAGGGCTGCGTGTGAGAAGTTGAAGAAGGTGCTTAGTGCAAATCCAGAGGCACCTTTGAACATTGAGTGCTTAATGGATGAAAAGGACGTTAGGGGCCATATAAAGCGGGATGAGTTTGAGCAACTAAGTCTTTCCATTTTGGAACGTGTGAAAGGACCTTTAGAGAAGGCACTTGCAGAAGCAGGTCTTACAATTGAGGATGTGCATATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATATTGACTGAGTTTTTTAAAAAGGAGCCTAGGAGGACAATGAATGCTAGTGAATGTGTTGCTAGGGGTTGTGCTCTGCAATGTGCAATTCTCAGTCCAACTTTTAAAGTTCGGGAGTTTCAGGTCAATGAAAGCTTTCCTTTCTCAATTTCTCTGTCGTGGAAAGGTTCAGATTCAGATGCACCAGATAGTGGAGCAGATAACAAGCCAAGTACCCTTGTTTTTCCCAAGGGAAATCCCATACCAAGTTTCAAGCAACTGACATTCTTCAGGACGGGAACCTTTTCAATTGATGTACAATATGATGATGTGAGTGGTTTGACTACACCTGCAAAAATCAGCTCATACACTATTGGCCCTTTCCAATCTACTAAAGGTGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATCTGCATGGAATTGTATATGTTGAGTCAGCAACTCTTATCGAGGAGGAAGAAATTGAAGTTCCAGTTGCCAAAGAGTCAGCTGGAGAAAGTACCAAGATGGAAACTGATGAAGCTTCTGCACCACCTAGCTCCAATGACAATGATGTTAACATGCAAGATGCTACAACAATCCCTGCTGATACCCCTGGAGCCGAAAATGGCATCCCTGAGGCAGGAGATAAGCCTGTGCAGATGGATACTGATACCAAGGTTGAAGCTCCAAAGAAAAAGGTGAAAAAAACCAATGTTCCTGTGGCAGAGATAGTTTATGGGGCGATGGCATCTGTGGATGTCCAGAAAGCTGTAGAAAAGGAGTTTGAAATGGCTTTGCAAGACCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAGTGACAAATACCAAGAGTTCGTCACTCCTTCAGATAGGGACAGTTTGATGGCTATACTTCAGGAGGTGGAAGACTGGCTATATGAGGAAGGTGAAGATGAGACCAAAGGGGTATACGTTGCCAAGCTAGAGGAGCTCAAAAAGCGAGGTGATCCAATAGAAGAGCGTTACAAAGAGTACACAGATAGAGGTGCAGTTATTGACCAACTTGTCTATTGTATAAATAGCTACAGAGAAGCTGCAATGTCAAATGATCCCAAGTTCGAGCACATTGACATCAACGAGAAACAGAAGGTCTTAACTGAATGTGTTGAAGCCGAGAACTGGCTTAGGGAGAAGAAGCTCCAACAGGACTCGCTCCCAAAACATGCCAACCCTGTACTCTTGTCAGCTGACATAGGAAAGAGAGCTGAGGCTGTTGATAAGTTCTGTAAGCCTATAATGACGAAACCAAAGCCGGTGAAGCCAGCTACACCAGAACCAGCAACCCCGCCTCCTCAGGGTGGAGACCAGCAGCAGCAACAACAGCAGCCACCTCAGGGCGATGCTAATGCCAGCCCTAATGAGAATGCAGGGGAAAGCGGCGATCAGGTCCCACCAGCTTCTACTGAGCCAATGGAGACTGAAAAACCAGACAACACTGGCTCTGCCTAA 2562 0.4524 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGASSTMMNPKNSISQLKRLIGRQFADPELQRDLKSLPFAVTEGPDGFPLIHARYLGETRTFTPTQVFGMMLSNLKEIAQKNLNAAVVDCCIGIPIYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDPLNVAFVDVGHASMQVCIAGYKKGQLKVLAHSYDRSLGGRDFDEVLFNHFVAKFKEQYKIDVLQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGHIKRDEFEQLSLSILERVKGPLEKALAEAGLTIEDVHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSDSDAPDSGADNKPSTLVFPKGNPIPSFKQLTFFRTGTFSIDVQYDDVSGLTTPAKISSYTIGPFQSTKGEKAKVKVKVRLNLHGIVYVESATLIEEEEIEVPVAKESAGESTKMETDEASAPPSSNDNDVNMQDATTIPADTPGAENGIPEAGDKPVQMDTDTKVEAPKKKVKKTNVPVAEIVYGAMASVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLSDKYQEFVTPSDRDSLMAILQEVEDWLYEEGEDETKGVYVAKLEELKKRGDPIEERYKEYTDRGAVIDQLVYCINSYREAAMSNDPKFEHIDINEKQKVLTECVEAENWLREKKLQQDSLPKHANPVLLSADIGKRAEAVDKFCKPIMTKPKPVKPATPEPATPPPQGGDQQQQQQQPPQGDANASPNENAGESGDQVPPASTEPMETEKPDNTGSA* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5134 853 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Lja3g5134 853 MobiDBLite consensus disorder prediction 523 537 - -
Lja3g5134 853 CDD HSPA4_like_NDB 2 381 - -
Lja3g5134 853 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lja3g5134 853 MobiDBLite consensus disorder prediction 803 833 - -
Lja3g5134 853 Gene3D - 594 702 IPR029048 -
Lja3g5134 853 Gene3D Actin; Chain A, domain 4 230 313 - -
Lja3g5134 853 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 591 IPR029047 -
Lja3g5134 853 Gene3D - 5 374 - -
Lja3g5134 853 MobiDBLite consensus disorder prediction 788 802 - -
Lja3g5134 853 MobiDBLite consensus disorder prediction 510 537 - -
Lja3g5134 853 Gene3D - 38 113 - -
Lja3g5134 853 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 626 IPR029047 -
Lja3g5134 853 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 851 - -
Lja3g5134 853 PRINTS 70kDa heat shock protein signature 363 383 - -
Lja3g5134 853 PRINTS 70kDa heat shock protein signature 30 42 - -
Lja3g5134 853 PRINTS 70kDa heat shock protein signature 140 160 - -
Lja3g5134 853 PRINTS 70kDa heat shock protein signature 2 15 - -
Lja3g5134 853 PRINTS 70kDa heat shock protein signature 332 348 - -
Lja3g5134 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 705 790 IPR029048 -
Lja3g5134 853 Pfam Hsp70 protein 3 694 IPR013126 GO:0005524|GO:0140662
Lja3g5134 853 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lja3g5134 853 MobiDBLite consensus disorder prediction 782 853 - -
Lja3g5134 853 MobiDBLite consensus disorder prediction 544 563 - -
Lja3g5134 853 Gene3D - 186 360 - -
Lja3g5134 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 595 693 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5134 Lja-Chr3 93685009 93690721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5134 4 438 Calmodulin-binding Proteins AT1G16030 35.160 6.03e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5134 K09489 - gmx:100813658 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5134 3 93685009 93690721 Lja3g5134 3 93685009 93690721 ECH
Lja3g5134 3 93685009 93690721 Lja3g2087 3 24310800 24317374 PCT