Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5121 ATGGGACATTACTTGGTCATTCAACGATGGAGACCTGAATTTATTCCAATCGAAGGGGACGTGAACATGGCCTTAGTTTGCATCTATATCCTAAAGTTGCAAGTGGAGTATTGTGGGAAGAATTTTCTTCGCAAGATTGCGCAGGTGCTTGGGCGTCTGATTAAGATAGATGCTCACACCTTGAAGGAAGGGGAGCGCTCTTCCAGAGCTTCTGTGTCCGCATACAGAGAAAGGCTTGCAATATGCAACAAGGTAGATCTTCAGAAGTCTCTCATTTTGAAGTTTGAGATGAATGAGCTGGAGTACAAGGCATATCGGTTCCCCCATACAAGGGGGCCAGAGCAGGATCCTCCAAACGGAGTGCAGCAAGACAACGAAGGTGGCGTGGAAGGAGAATCAAATTTTGATCCCTGGATGATCGCAAAACCCACAACACTAAATCTCATAACTCTCCAACACTCTTGCAAGTTGCTAGCTGCTCCTCGCTCTCCAGGAAAGAGGAGCAACCGTATCACTAGCTATTCCATTAGCAACTGTTCCAAGGTGATAATGGAGTACTCAACAGAGTTTCTTACAAGCAGCTTTGGCAGAGAGTTTGTAGCTGGAGGATTTGGAGGCACAGCTGGTCTGATCTCCAGCTACCCGCTGGACACGCTCCGCGTCATCATGCAACAGAAATCCAACAGCGGCTCCGCCTTCAACATCTTCAAGAATGTGTTGGCCAAGGAAGGACCAACCGCTCTGTACCGTGGCATGGCGATGCCTTTGGGCTCTGTTGCTTTTCAGAACGCCATGGTTTTTCAAAGTTATGCAACTTTCACCAAGCTCTTTAGCTCATCTTCCAATGGCCCTCCTTCCATGGTGAATGTTGCATTAGGAGGACTTGGCGCCGGTGCACTTCAAAGTTTATTGATGTCTCCTGTTGAGTTGGTTAAAATTCGCCGTCAGCTGCAAAATAGTACAGGCCAATTGACTGAAACTGAAAAGAGTCCTCTTAGGATTGCTAAGAAAATTTGGACGAATGAGGGTCTTCGCGGCATGTATCGAGGATTTGGTGTCACTGTGCTCAGAGATGCACCTGCTCATACCTTCTACTTTTGTACCTATGAGTACACAAAGGAAAAGCTTCACCCTGGTTGCAGGGAAAGTGGTCAAGAAAGCTTGGATACTATGTACATCGCAGGAGGATTAGCCGGGATAGCGAGCTGGATTTTCAACTACCCTACTGATGTCATAAAGACAAGATTGCAGGCTCAAACACCTTCTTCTATGAAATACAAAGGTATTGTGGATTGTGTGCTGAAGATCATTAAAGAAGAAGGTCATGCTGTGCTATGGCGTGGTTTGGGAGCTACGCTTGTTAGAGCGTTTGTCATGAATAGTGCTATATTTCCTGCTTATGAGTTCAGCCTTAGGTGTTTGTATAAGAACTGA 1434 0.4616 MGHYLVIQRWRPEFIPIEGDVNMALVCIYILKLQVEYCGKNFLRKIAQVLGRLIKIDAHTLKEGERSSRASVSAYRERLAICNKVDLQKSLILKFEMNELEYKAYRFPHTRGPEQDPPNGVQQDNEGGVEGESNFDPWMIAKPTTLNLITLQHSCKLLAAPRSPGKRSNRITSYSISNCSKVIMEYSTEFLTSSFGREFVAGGFGGTAGLISSYPLDTLRVIMQQKSNSGSAFNIFKNVLAKEGPTALYRGMAMPLGSVAFQNAMVFQSYATFTKLFSSSSNGPPSMVNVALGGLGAGALQSLLMSPVELVKIRRQLQNSTGQLTETEKSPLRIAKKIWTNEGLRGMYRGFGVTVLRDAPAHTFYFCTYEYTKEKLHPGCRESGQESLDTMYIAGGLAGIASWIFNYPTDVIKTRLQAQTPSSMKYKGIVDCVLKIIKEEGHAVLWRGLGATLVRAFVMNSAIFPAYEFSLRCLYKN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5121 477 Gene3D Mitochondrial carrier domain 197 477 IPR023395 -
Lja3g5121 477 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 375 IPR018108 -
Lja3g5121 477 MobiDBLite consensus disorder prediction 108 134 - -
Lja3g5121 477 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 276 IPR018108 -
Lja3g5121 477 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 184 476 - -
Lja3g5121 477 ProSiteProfiles Solute carrier (Solcar) repeat profile. 386 473 IPR018108 -
Lja3g5121 477 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 184 476 - -
Lja3g5121 477 PRINTS Mitochondrial carrier protein signature 395 417 IPR002067 GO:0055085
Lja3g5121 477 PRINTS Mitochondrial carrier protein signature 348 366 IPR002067 GO:0055085
Lja3g5121 477 PRINTS Mitochondrial carrier protein signature 198 211 IPR002067 GO:0055085
Lja3g5121 477 PRINTS Mitochondrial carrier protein signature 211 225 IPR002067 GO:0055085
Lja3g5121 477 SUPERFAMILY Mitochondrial carrier 195 469 IPR023395 -
Lja3g5121 477 Pfam Mitochondrial carrier protein 392 477 IPR018108 -
Lja3g5121 477 Pfam Mitochondrial carrier protein 286 376 IPR018108 -
Lja3g5121 477 Pfam Mitochondrial carrier protein 194 279 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5121 Lja-Chr3 93569610 93575451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5121 184 477 Antiporters AT1G79900 59.459 4.97e-113 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5121 K15109 - gmx:100801221 398.667