Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5090 ATGTCATCATCCTTTTTGTTCCTCCTATGTTCTTGTCTCATCATTTTCTTAGCTTCTCCAAACACCCCTGTTGAAGCTGCAATGCAGTTCCAAGTTGGTGGTCACCTTGGCTGGCATGAACCCAATGAGACTGAGTTTTACACCCAATGGGCTGAAAGGAACAGATTCCAAATTGGAGACTCTCTTGTTTTTGAGTACCAGGATGACTCTGTTCTCAGTGTGGAGAAAAGTGATTACTTTGATTGTGACACAAGTGACCCCATCACTGCTTTTGACAATGGGAAAAGCACTTTCAACCTTGAAAGATCTGGAGCATTCTACTTCATCAGTGGAACTGGTGATCACTGCAAAAATGGGCAAAAGTTGCTTGTGGAGGTTATGTCTCAGCATCCAGGTATCAAATCTCCACCACCAGTTTCTGAAGCCCCTGCAAATGCTCCTCAAGGTTTCTCAGGAATGGCTCCTTCACCTCAAAGTTTCTCAGACAGTGCTTCTTCACCTTCTGATGGCTATGAGTCTTCAGCATCTGTGATGCTAATTAGTTCAACTTTTGTGGCTCCTTTGGTCATGTTTGTTTCTGTGCTGCTGTTAGCACACTGA 600 0.44 MSSSFLFLLCSCLIIFLASPNTPVEAAMQFQVGGHLGWHEPNETEFYTQWAERNRFQIGDSLVFEYQDDSVLSVEKSDYFDCDTSDPITAFDNGKSTFNLERSGAFYFISGTGDHCKNGQKLLVEVMSQHPGIKSPPPVSEAPANAPQGFSGMAPSPQSFSDSASSPSDGYESSASVMLISSTFVAPLVMFVSVLLLAH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5090 199 SUPERFAMILY Cupredoxins 27 127 IPR008972 -
Lja3g5090 199 Gene3D - 28 135 IPR008972 -
Lja3g5090 199 Pfam Plastocyanin-like domain 38 120 IPR003245 GO:0009055
Lja3g5090 199 PANTHER EARLY NODULIN-LIKE PROTEIN 2 18 192 - -
Lja3g5090 199 MobiDBLite consensus disorder prediction 130 167 - -
Lja3g5090 199 PANTHER BLUE COPPER PROTEIN 18 192 IPR039391 GO:0009055
Lja3g5090 199 CDD OsENODL1_like 29 127 IPR041846 -
Lja3g5090 199 MobiDBLite consensus disorder prediction 151 167 - -
Lja3g5090 199 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5090 Lja-Chr3 93249526 93250223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5090 2 130 Phytocyanin Superfamily AT1G79800 47.328 6.87e-40 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5090 - - gmx:102664880 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5090 3 93249526 93250223 Lja3g5090 3 93249526 93250223 ECH