Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5064 ATGTTTGTCTGTAAAAAGTTTTCAATTCAATATACAAAGTTTAGAAATGAAATGGCAGGGCTCTTGCTACTTTTAGTGTTTCAACTTTCCTGGACTCTTCCTATCATTGTTCATGCCCAGGATCAATCAGGCTTCATTAGTATTGACTGCGGACTTGAGGATGAACCAAGTTACACAGATGAAACTACATCCATCCATTACACTTCAGATGTCAACTTCACAGACACAGGTGTAAGCCACAGCATATCACCTAAATATGAGGCTTCCCTTGAAAGGCAGTTCTGGAATGTTAGAAGCTTCCCGGGAGGAAGAAGGAACTGCTACACCCTTGTTGTTCCTCAAGGAAGAAGCAAGAAATATTTAGTGAGGGCCAGGTTTGTCTATGGAAACTATGATGGCAACGGCTCTCTTCCCGAGTTTGATATCTATCTTGGAGACAAGTGGTGGGAATCATTGGTGTTTGAGGATGCATCCAGTGTAATAACCAAGGAAATCATTTATGCTGCTTCATCAGATTATGTCCATGTTTGCCTATTCAACACTGGAAAGGGTACACCTTTTATTTCAGTTTTGGAGCTAAGAGTTCTTAACAGTGATGCCTATCTAGTTAACTCTCTGGAGTTGTTGGCGCGTTTTGATGTAGGCTTACGGGATGGTGAAATAATCAGATATCCAGATGATACCTTTGATAGAATGTGGACACCTTATAACTCAATTGAATGGAAACTGATGAATACCTCACTCACAATAGACCAGGGAGCACCCTCATTCAATTTTTTACCATTACCACCGTCCATTGTTTCTAGCACAGCAGCAATTCCAGCTAATGTCAACGACAACATAGAATTTTACTACCATCCCAAGTACAATGCCTCCACATACTATATGTACATGTACTTTGATGAAATCAAGAAGCTCCAGGCAAATCAAATTAGAGAGTTCGACATCTTTGTAAATGGGAAGCTTTTCAATAATGATCCAGTCAATCCAGTGTACCTGAAGAGCTTGTATTACATATCAGCTATAGCCAAACCTCATTTGGAACTTTGGATTAATAGAACTAGTAGATCAACTCTTCCCCCTCTCATCAATGCTATTGAGATATACATGACAAAGGACTTCTTACAATCACAAACATATCAAACAGATGCTGATGCTATCATAAATGTTAAATCAATTTATGGGATCAAGAGAAACTGGCAAGGAGATCCTTGTATTCCACTTGCTTACTTGTGGGATGGTCTTAACTGCAGCTATGCTGAATCTGATTCACCAAGGATCATATACTTGAACTTATCTTCTAGTGGTTTGATTGGAAATATAGCTCCTAGCATATCCAATATGAAGTCGATAGAATATTTGGATTTGTCAAACAACAATCTGACTGGGGCATTACCTGATTTCCTATCTCAACTGCGCTTCTTGAGAGTTCTCAACCTGGAAGGAAATCAGCTATCAGGAACAATTCCAATGCCACTCACTGTGCGTTCCAAGAATGATTTGCTTGAATCCAATTTTGGTGGAAACCCAGATCTTTGCTCACCAGGTTCATGCAACCAAAAGAATGGGAATAAGTTTGTAGTTCCACTGGTGGCATCACTTGCTGGAACTTTCATGATACTAATAACCACATTGATTTCTTTCCGAATATACAACATGAGACGAGTTTCCCCTCATCAGAGCAAGCCAATTGTTTATTCAAGAATAAAGGAGGAACTAGAGTCAAATAAGCAAGAATTCACCTATGCTGAAGTATTGAGCATGACAAGAAACCTTGAAAGGATTGTGGGGAAAGGAGGATTTGGAATAGTCTACCATGGTTGTGTAGGTGATATTGAGGTAGCTGTCAAAATGCTTTCTCCCTCTGCTCAAGGATATCTGCAATTTCAGGCAGAGGCTAAATTTCTAGCTAAAGTTCATCATAAATGCTTGACTGCTCTTATAGGATACTGTGATGATGGCACCAACATGGCTCTCATCTATGAGTATATGGCTAATAGCGACTTAGCAAAGCATTTATCAGGTAAAAATGAAAATATATTGGGTTGGAATCAACGACTTCAAATTGCAGTGGATGCTGCAGAAGGATTGGAGTATCTGCATCACGGAAGCAATCCACCAATTGTTCACAGAGATGTTAAATCTAAAAACATCTTACTGAATGAAAAATTCCAGGCTAAACTTGCTGATTTTGGGTTGTCAAAGATCTTTCCCAATGAAGGTGACACCCATGTGTACACAGTGGTTGCTGGCACCCCAGGATATCTTGACCCAGAGTACAATAGATCAAGCAGGTTGAATGAGAAAAGTGATGTGTTCAGTTTTGGGGTAGTTTTGCTTGAGTTAATTACGGGCCAACCAGCCGTGACCAAAACTGAAGACAAAATTCACATAATTCAATGGGTTAGTTCCTTGCTGCTCCAGAGGGAGGTCAAAGATATTGTAGATCCCAGATTACAGGGAGAATTTGATATTGATTCTGCAAAGAAAGCCTTAGATACTGCAATGACTTGTGTAGCACCTACTTCCATTAATAGGCCAACCATGAGCCATGTAGTTATGGAACTGAAACTATGTTTGCCAAAGAAGATGAGTAATCAGCCTGAATGTGACAATAATGAGAGATTACAGAGCTGCTTAAACAGTGTGTCCTTTGATAGAATTAGTGGAGAGAGCTCTCTAGAAAGGTAG 2691 0.3973 MFVCKKFSIQYTKFRNEMAGLLLLLVFQLSWTLPIIVHAQDQSGFISIDCGLEDEPSYTDETTSIHYTSDVNFTDTGVSHSISPKYEASLERQFWNVRSFPGGRRNCYTLVVPQGRSKKYLVRARFVYGNYDGNGSLPEFDIYLGDKWWESLVFEDASSVITKEIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNSLELLARFDVGLRDGEIIRYPDDTFDRMWTPYNSIEWKLMNTSLTIDQGAPSFNFLPLPPSIVSSTAAIPANVNDNIEFYYHPKYNASTYYMYMYFDEIKKLQANQIREFDIFVNGKLFNNDPVNPVYLKSLYYISAIAKPHLELWINRTSRSTLPPLINAIEIYMTKDFLQSQTYQTDADAIINVKSIYGIKRNWQGDPCIPLAYLWDGLNCSYAESDSPRIIYLNLSSSGLIGNIAPSISNMKSIEYLDLSNNNLTGALPDFLSQLRFLRVLNLEGNQLSGTIPMPLTVRSKNDLLESNFGGNPDLCSPGSCNQKNGNKFVVPLVASLAGTFMILITTLISFRIYNMRRVSPHQSKPIVYSRIKEELESNKQEFTYAEVLSMTRNLERIVGKGGFGIVYHGCVGDIEVAVKMLSPSAQGYLQFQAEAKFLAKVHHKCLTALIGYCDDGTNMALIYEYMANSDLAKHLSGKNENILGWNQRLQIAVDAAEGLEYLHHGSNPPIVHRDVKSKNILLNEKFQAKLADFGLSKIFPNEGDTHVYTVVAGTPGYLDPEYNRSSRLNEKSDVFSFGVVLLELITGQPAVTKTEDKIHIIQWVSSLLLQREVKDIVDPRLQGEFDIDSAKKALDTAMTCVAPTSINRPTMSHVVMELKLCLPKKMSNQPECDNNERLQSCLNSVSFDRISGESSLER* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5064 896 Pfam Malectin-like domain 48 370 IPR024788 -
Lja3g5064 896 CDD STKc_IRAK 596 857 - -
Lja3g5064 896 PANTHER TYROSINE KINASE FAMILY PROTEIN 27 896 - -
Lja3g5064 896 ProSiteProfiles Protein kinase domain profile. 590 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5064 896 SUPERFAMILY L domain-like 386 493 - -
Lja3g5064 896 Pfam Protein kinase domain 593 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5064 896 SMART serkin_6 590 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5064 896 PANTHER OS07G0107800 PROTEIN-RELATED 27 896 - -
Lja3g5064 896 ProSitePatterns Protein kinases ATP-binding region signature. 596 617 IPR017441 GO:0005524
Lja3g5064 896 Gene3D Ribonuclease Inhibitor 385 503 IPR032675 -
Lja3g5064 896 Pfam Leucine rich repeat 429 485 IPR001611 GO:0005515
Lja3g5064 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Lja3g5064 896 SUPERFAMILY Protein kinase-like (PK-like) 575 856 IPR011009 -
Lja3g5064 896 Gene3D Transferase(Phosphotransferase) domain 1 664 883 - -
Lja3g5064 896 Gene3D Phosphorylase Kinase; domain 1 572 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5064 Lja-Chr3 92824412 92830178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5064 21 857 Receptor kinase-like Gene Family AT2G19210 48.531 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja3g5064 Malectin_like 2.7e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5064 - - pvu:PHAVU_005G162000g 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5064 3 92824412 92830178 Lja3g5064 3 92824412 92830178 ECH