Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5029 ATGGCAACAACCAATGGAGAATTAGCATCACCAAGGGTCCAATACCCACTTGACTCTTCCTCCTACAAGCTCCTTGATGAGATAGGTGCTGGCACCAGCGCCATTGTCTACAAGGCCATCTGCCTCCCCATGAACTCTGCACCGGTCGCGATCAAGTCGATTGATCTCGACCGGTCGCGCCTGAACTTTGATGACGTTCGTCGCGAAGCCAAGGCGCTGTCTCTGCTCTCTCACCCTAACGTCCTGAGAGCTCATTGCTCATTTGCCGTAGACCGCCGTCTCTGGGTGGTGATGCCATTCATGGCTGGAGGGTCCTTGCAGTCCATCATCTCTCACTCGTTCCCGGATGGCTTGGCGGAACCGTGCATTGCGGTGGTTCTCAAAGAGACCCTCAACGCTCTCTCTTACCTTCATGGCCAGGGCCACCTTCACAGAGACATCAAAGCTGGTAACATCCTGGTAGACTCAAACGGATCAGTGAAGCTAGCAGATTTTGGTGTCTCAGCCTCCATTTACGAATCCATGAGTGGCTGCGGACCCAGTTCATCATCTTCTTCATCTCTCATGTTAACCGATCTCGCCGGAACACCATATTGGATGGCCCCTGAGGTCATTCACTCCCACAAAGGCTACAGTTTCAAAGCAGACATCTGGTCATTCGGCATAACAGCTCTTGAGCTTGCACATGGAAGACCACCACTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTCAAAATCACCAAAAGGTTCAAGTTTTCTGATCTTGACAAGCACAGAAAGGAAAGTGGTAAAAACAAGTTTTCAAAGGCTTTCAGAGACATGGTTGCTTCTTGTCTTGATCAGGATCCTTCTAAGAGACCAACTGCAGAGAAATTGCTGAAGCATGCGTTCTTCAAGAACTGTAAGACTCCAGAGTTTCTCGTGAAGAATGTGTTGCAGGGGTTGCCGAGTGTTGAGAAGAGGTATAGAGAGAGTAAGGCTATGAATGATGATGATGATGAAGAGAATGAAGCAGAGATGAAACAGAGTGCGAAACAGAGGAGGATCAGTGGTTGGAACTTCAATGAAGTTGGATTGGAGTTGGAGCCAGTTTTCCCCAATTGTGATTATTTGAATTCCCCTAAGGATGATCCATCTAAACAAGTTCAATTTGAAGTTGAGCCCGTGATCCAAGACATGGGTGGAAAATTAGAAGAGCATGCTGAAAACCCAACTGATCCTGGTGAGGTTGAAGTGGAAAAGACTACATTGGTGGAAAAAGTAGTTGGTGGTGTTGAGGTTGTGAACAATGGTGAATCCATGTTGGCTACTTTGAATGTGTTGAAAGGGAGCTTGGAACAGGAGCTGGGACAGGTCAAGTTTCTGATGAATCTGATAAGAGAAGGTGGAGAGGAGATTCAAGATGGTGATGGTGAGGGGAAAGAGATTTCTAGGCTGAGGAATGAGTTGGAAAATGAGAGGAAGAAGAACTTGGAGTTGGAGTTGCAGCTAGAGGATTTCAAGCTTCAGCTTTCTTCTGCTTAA 1527 0.4741 MATTNGELASPRVQYPLDSSSYKLLDEIGAGTSAIVYKAICLPMNSAPVAIKSIDLDRSRLNFDDVRREAKALSLLSHPNVLRAHCSFAVDRRLWVVMPFMAGGSLQSIISHSFPDGLAEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESMSGCGPSSSSSSSLMLTDLAGTPYWMAPEVIHSHKGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFKFSDLDKHRKESGKNKFSKAFRDMVASCLDQDPSKRPTAEKLLKHAFFKNCKTPEFLVKNVLQGLPSVEKRYRESKAMNDDDDEENEAEMKQSAKQRRISGWNFNEVGLELEPVFPNCDYLNSPKDDPSKQVQFEVEPVIQDMGGKLEEHAENPTDPGEVEVEKTTLVEKVVGGVEVVNNGESMLATLNVLKGSLEQELGQVKFLMNLIREGGEEIQDGDGEGKEISRLRNELENERKKNLELELQLEDFKLQLSSA* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5029 508 MobiDBLite consensus disorder prediction 323 345 - -
Lja3g5029 508 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Lja3g5029 508 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
Lja3g5029 508 Gene3D Transferase(Phosphotransferase) domain 1 104 354 - -
Lja3g5029 508 SUPERFAMILY Protein kinase-like (PK-like) 20 335 IPR011009 -
Lja3g5029 508 Coils Coil 477 504 - -
Lja3g5029 508 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 4 503 - -
Lja3g5029 508 ProSiteProfiles Protein kinase domain profile. 22 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5029 508 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 503 - -
Lja3g5029 508 SMART serkin_6 22 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g5029 508 Pfam Protein kinase domain 22 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5029 Lja-Chr3 92471384 92473932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5029 8 492 MAP Kinase Kinase Kinase Kinase AT4G14480 55.488 8.09e-172 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lja3g5029 Pkinase 2.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5029 K08835 - lja:Lj3g3v0312120.1 649.432