LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g5029	ATGGCAACAACCAATGGAGAATTAGCATCACCAAGGGTCCAATACCCACTTGACTCTTCCTCCTACAAGCTCCTTGATGAGATAGGTGCTGGCACCAGCGCCATTGTCTACAAGGCCATCTGCCTCCCCATGAACTCTGCACCGGTCGCGATCAAGTCGATTGATCTCGACCGGTCGCGCCTGAACTTTGATGACGTTCGTCGCGAAGCCAAGGCGCTGTCTCTGCTCTCTCACCCTAACGTCCTGAGAGCTCATTGCTCATTTGCCGTAGACCGCCGTCTCTGGGTGGTGATGCCATTCATGGCTGGAGGGTCCTTGCAGTCCATCATCTCTCACTCGTTCCCGGATGGCTTGGCGGAACCGTGCATTGCGGTGGTTCTCAAAGAGACCCTCAACGCTCTCTCTTACCTTCATGGCCAGGGCCACCTTCACAGAGACATCAAAGCTGGTAACATCCTGGTAGACTCAAACGGATCAGTGAAGCTAGCAGATTTTGGTGTCTCAGCCTCCATTTACGAATCCATGAGTGGCTGCGGACCCAGTTCATCATCTTCTTCATCTCTCATGTTAACCGATCTCGCCGGAACACCATATTGGATGGCCCCTGAGGTCATTCACTCCCACAAAGGCTACAGTTTCAAAGCAGACATCTGGTCATTCGGCATAACAGCTCTTGAGCTTGCACATGGAAGACCACCACTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTCAAAATCACCAAAAGGTTCAAGTTTTCTGATCTTGACAAGCACAGAAAGGAAAGTGGTAAAAACAAGTTTTCAAAGGCTTTCAGAGACATGGTTGCTTCTTGTCTTGATCAGGATCCTTCTAAGAGACCAACTGCAGAGAAATTGCTGAAGCATGCGTTCTTCAAGAACTGTAAGACTCCAGAGTTTCTCGTGAAGAATGTGTTGCAGGGGTTGCCGAGTGTTGAGAAGAGGTATAGAGAGAGTAAGGCTATGAATGATGATGATGATGAAGAGAATGAAGCAGAGATGAAACAGAGTGCGAAACAGAGGAGGATCAGTGGTTGGAACTTCAATGAAGTTGGATTGGAGTTGGAGCCAGTTTTCCCCAATTGTGATTATTTGAATTCCCCTAAGGATGATCCATCTAAACAAGTTCAATTTGAAGTTGAGCCCGTGATCCAAGACATGGGTGGAAAATTAGAAGAGCATGCTGAAAACCCAACTGATCCTGGTGAGGTTGAAGTGGAAAAGACTACATTGGTGGAAAAAGTAGTTGGTGGTGTTGAGGTTGTGAACAATGGTGAATCCATGTTGGCTACTTTGAATGTGTTGAAAGGGAGCTTGGAACAGGAGCTGGGACAGGTCAAGTTTCTGATGAATCTGATAAGAGAAGGTGGAGAGGAGATTCAAGATGGTGATGGTGAGGGGAAAGAGATTTCTAGGCTGAGGAATGAGTTGGAAAATGAGAGGAAGAAGAACTTGGAGTTGGAGTTGCAGCTAGAGGATTTCAAGCTTCAGCTTTCTTCTGCTTAA	1527	0.4741	MATTNGELASPRVQYPLDSSSYKLLDEIGAGTSAIVYKAICLPMNSAPVAIKSIDLDRSRLNFDDVRREAKALSLLSHPNVLRAHCSFAVDRRLWVVMPFMAGGSLQSIISHSFPDGLAEPCIAVVLKETLNALSYLHGQGHLHRDIKAGNILVDSNGSVKLADFGVSASIYESMSGCGPSSSSSSSLMLTDLAGTPYWMAPEVIHSHKGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFKFSDLDKHRKESGKNKFSKAFRDMVASCLDQDPSKRPTAEKLLKHAFFKNCKTPEFLVKNVLQGLPSVEKRYRESKAMNDDDDEENEAEMKQSAKQRRISGWNFNEVGLELEPVFPNCDYLNSPKDDPSKQVQFEVEPVIQDMGGKLEEHAENPTDPGEVEVEKTTLVEKVVGGVEVVNNGESMLATLNVLKGSLEQELGQVKFLMNLIREGGEEIQDGDGEGKEISRLRNELENERKKNLELELQLEDFKLQLSSA*	509

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lja3g5029	508	MobiDBLite	consensus disorder prediction	323	345	-	-
Lja3g5029	508	ProSitePatterns	Protein kinases ATP-binding region signature.	28	52	IPR017441	GO:0005524
Lja3g5029	508	Gene3D	Phosphorylase Kinase; domain 1	11	100	-	-
Lja3g5029	508	Gene3D	Transferase(Phosphotransferase) domain 1	104	354	-	-
Lja3g5029	508	SUPERFAMILY	Protein kinase-like (PK-like)	20	335	IPR011009	-
Lja3g5029	508	Coils	Coil	477	504	-	-
Lja3g5029	508	PANTHER	SERINE/THREONINE-PROTEIN KINASE BLUS1	4	503	-	-
Lja3g5029	508	ProSiteProfiles	Protein kinase domain profile.	22	299	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lja3g5029	508	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	4	503	-	-
Lja3g5029	508	SMART	serkin_6	22	299	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g5029	Lja-Chr3	92471384	92473932	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja3g5029	8	492	MAP Kinase Kinase Kinase Kinase	AT4G14480	55.488	8.09e-172	491

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Lja3g5029		Pkinase	2.3e-59	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g5029	K08835		-	lja:Lj3g3v0312120.1	649.432

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