Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5014 ATGACATACCAACACATTGTCTTCTGCATGATTGGAGTGAAGAAAGAAGGTTCCACCAGCAGTGAGGTGACTAAGAATGATGTGGTCACTGCATTGCGCCACAGCATTGAGAAAATGGTGTGTGTATCCAGAGATATCATTCAAATATTAAGTAGGATGTCCTATGAAGGCTTGGATGAACAGAGGATGCATCTAGTGTTGAGGATGAGAGACATTGCTAACAGGGTTATTGATAAACAACCCAGAGTTGCAATAACTAAGCCTGACTCACTCTCAGAGCAAGTTGGCTTAATGGATGAAGGGATGAAAGATAGTCCCGTGGGTGAGTCATCAAAGATCAGCAATGGGGATGTCCTGATTGATGAGGCACAAAGCATGATGGATGAAGATGATATGTTGGATGTGGAACATGTTTTAAGATTTGAAAACGGGGTAGACGATGTACATGAGTCTCTGTTACCATCAGGCTTTCGGCAATGTCTTTTATGGCCTCCTGATGATTGTGTCACCTTAGAGTGGGTTCAGGAAATGATGTTCATCCTTGAGCAGGCTTCATGGAAGATGTTGCCGTCTGAATTCTGTCAGGTTGTGCCAACCATTTTGGTGGATAAATTGACAGATGCTGCTCATAGTATTTTAAGTAAAGAACCAAACTGTGTAGAGATTAATTATCAAGGAGAAGATTCAAGAGTCATTGTTGTAGGCGATATACATGGGCAGTTTCATGACTTGATGTTTCTTTTGAAGCATGCAGGAGTTCCTTCTGAGAACCAGTGTTATGTTTTCAATGGGAATTATGTAGATAAAGGAGCTTGGGGCATTGAAGTATTTTTGGTCTTGCTGGCTTGGAAGGTCTTGATGCCTCACAGAGTATTTTTACTCCGTGGAAGTCATGAATCAAGATATTGCACCACAATATATGGTTTTAGGGAAGAGGTGTGGACCAAGTATGGCGATCAAGGTGAAGATATCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCGTTAGCTTCAGTTGTTGGTAACTGTGTTTATACTACTCATGGAGGGCTTTTCCGTAGCATTCATTCTGCCTCTTCAGGAAAGCCAAAACTGAAGAAGTCACAAAATGTGGATCTTGGTTCTTTAGCTGAGTTATCTGAGGTTAATAGAGCTTGCGTAGATTCCCCGTATGACGGTCATGACTTATTATTGAGTTACGTTCTTTGGTCAAAACCCTCTCACAGGGATGGTCTGAGGGACAATGCTGGTCAAAATTTAGGTTTATGGTGGGGTCCTGATTGTACCGAGGCTTTCTTAAAGCAGCACAATTTAAAGCTGATCATCAGATCACATGAAGGACCTGATGCAAGGGCTGATAGGGATGATTTTGGGGATATGTTGAGTGGATACAGCATAGATCATGATGGAGAATCAGGAAAGCTATATACACTTTTTAGTGCTCCTGACTACCCACAGTTTGGGACAAGGAGATTTAACAATGAAGGAGCATATGCAATATTGAAGTCGCCTGATTTGGCAAGCCCTACCTTTCATTCATTCAAATCAGTAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGATGCTAACGACATGGACTTGAGTGAACTAGACTCTTCTCAAATCGCCTCAACCTCTTCCTCTTCTGCTCCAGTTGGGCCGATACCCGAGTTTGACTTCGAGTGTTTAGGCATATATAATGCCCCAAGTTGGGGTGTTCAGTTTCCTGATAGTTCAGGCCGTACTCAAGTTGTGCCGATTCCTAGGGCTCCTTTGGTGGAAGGATTGCCTCTGCCTCCCAACATACAGGAGCCACACAAGGCTGCTTATGAGTACTTGTTCGAGCTTGTTGCTGCCCTAAAACATACGATTGTAACAAGGGAGACTGAGAACAGAACACTTGTGTCAGCTTTGCGGAGTAGAACTAGGAAACGAAAGGGTAGAGGTAACACTTGA 1962 0.4276 MTYQHIVFCMIGVKKEGSTSSEVTKNDVVTALRHSIEKMVCVSRDIIQILSRMSYEGLDEQRMHLVLRMRDIANRVIDKQPRVAITKPDSLSEQVGLMDEGMKDSPVGESSKISNGDVLIDEAQSMMDEDDMLDVEHVLRFENGVDDVHESLLPSGFRQCLLWPPDDCVTLEWVQEMMFILEQASWKMLPSEFCQVVPTILVDKLTDAAHSILSKEPNCVEINYQGEDSRVIVVGDIHGQFHDLMFLLKHAGVPSENQCYVFNGNYVDKGAWGIEVFLVLLAWKVLMPHRVFLLRGSHESRYCTTIYGFREEVWTKYGDQGEDIYNKFLECFKELPLASVVGNCVYTTHGGLFRSIHSASSGKPKLKKSQNVDLGSLAELSEVNRACVDSPYDGHDLLLSYVLWSKPSHRDGLRDNAGQNLGLWWGPDCTEAFLKQHNLKLIIRSHEGPDARADRDDFGDMLSGYSIDHDGESGKLYTLFSAPDYPQFGTRRFNNEGAYAILKSPDLASPTFHSFKSVERPMVDPYVDFDANDMDLSELDSSQIASTSSSSAPVGPIPEFDFECLGIYNAPSWGVQFPDSSGRTQVVPIPRAPLVEGLPLPPNIQEPHKAAYEYLFELVAALKHTIVTRETENRTLVSALRSRTRKRKGRGNT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5014 653 Gene3D - 170 551 IPR029052 -
Lja3g5014 653 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 102 638 - -
Lja3g5014 653 Pfam Calcineurin-like phosphoesterase 230 449 IPR004843 GO:0016787
Lja3g5014 653 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 102 638 - -
Lja3g5014 653 SMART pp2a_7 197 519 IPR006186 GO:0016787
Lja3g5014 653 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Lja3g5014 653 PRINTS Serine/threonine phosphatase family signature 293 317 IPR006186 GO:0016787
Lja3g5014 653 PRINTS Serine/threonine phosphatase family signature 330 356 IPR006186 GO:0016787
Lja3g5014 653 PRINTS Serine/threonine phosphatase family signature 230 257 IPR006186 GO:0016787
Lja3g5014 653 PRINTS Serine/threonine phosphatase family signature 475 491 IPR006186 GO:0016787
Lja3g5014 653 SUPERFAMILY Metallo-dependent phosphatases 192 525 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5014 Lja-Chr3 92328342 92335410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5014 161 441 Calmodulin-binding Proteins AT5G63870 50.690 1.52e-98 302