Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4989 ATGAGGTCAAGTATGTGTGTGGCTTTCCTACTAGTTGTTGCTTTTGCAGCGCTGAGCTCGAGTCCTGTGGCGGCGGCTACACCTCCACGGCCAAAGTTGGAGTGGCATTACTATAAGACCCACAACATATGCCGCGATGCTGAGTTGTATGTGAGGAACCAAGTAAAGCTGTTTTGGAAATTTGACAAAAGCATCACAGCAAAGCTCCTCCGCTTGGTATATTCAGATTGTTTCATCACAGGCTGTGACGCATCAATTCTGCTGGACGAAGGACCAAATACAGAGAAAAAAGCACCGCAAAACCGGGGGCTTGGAGCATTTGTACTGATTGACAATATAAAAACTTTCGTGGAAAGACAGTGCCCTGGCGTTGTCTCCTGTGCTGATATACTCCAACTGGCTACCAGAGATGCTGTTCAACTGGCAGGTGGACCAGGTTATCCAGTTTTCACCGGAAGAAAAGATGGAATGCGATCAGATGCTGCATCAGTAGACATTCCATCACCATCCGTCTCATGGCAGGAAGCTCTAGCATACTTCAAATCGAGGGGCTTGAATGTCCTAGATATGGGAACACTCTTGGGAGCACACACAATTGGAAGAACACATTGTAGCTACATTACTGATAGGCTGTATAATTACAATGGTACTGGAAGCTCAGACCCTAGCATGAATGCTGCTTTTCTAGACACGATGAGAAAGCTTTGTCCGCCAAGAAAGAAGGGGCAAAGTGACCCACTGGTATATCTGAACCCAGATTCTGGATCAAGTTACAAGTTCACAGAATCATACTACAAAAGGATCCTAAACCATGAAGCTGTTCTGGGAATTGATCAACAATTACTGAATGGTGATGATACTAAGGAGATCACCGAGGAATTTGCTGCTGGGCTTCAAGATTTTAAGAAATCTTTTGCTGTCTCAATGTACAACATGGGGAATATCAAAGTTTTAACAGGAAACCAAGGACAGATACGCCAGAATTGTCGATTTATAAATAAATAA 1005 0.4408 MRSSMCVAFLLVVAFAALSSSPVAAATPPRPKLEWHYYKTHNICRDAELYVRNQVKLFWKFDKSITAKLLRLVYSDCFITGCDASILLDEGPNTEKKAPQNRGLGAFVLIDNIKTFVERQCPGVVSCADILQLATRDAVQLAGGPGYPVFTGRKDGMRSDAASVDIPSPSVSWQEALAYFKSRGLNVLDMGTLLGAHTIGRTHCSYITDRLYNYNGTGSSDPSMNAAFLDTMRKLCPPRKKGQSDPLVYLNPDSGSSYKFTESYYKRILNHEAVLGIDQQLLNGDDTKEITEEFAAGLQDFKKSFAVSMYNMGNIKVLTGNQGQIRQNCRFINK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4989 334 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 Gene3D - 37 333 - -
Lja3g4989 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lja3g4989 334 PANTHER PEROXIDASE 25-RELATED 20 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 SUPERFAMILY Heme-dependent peroxidases 33 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 Pfam Peroxidase 51 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 Gene3D Peroxidase, domain 2 167 312 - -
Lja3g4989 334 CDD secretory_peroxidase 32 332 IPR033905 GO:0004601|GO:0042744
Lja3g4989 334 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 ProSiteProfiles Plant heme peroxidase family profile. 32 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja3g4989 334 PANTHER PEROXIDASE 61-RELATED 20 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4989 Lja-Chr3 92054669 92056316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4989 5 333 Peroxidase AT2G43480 63.473 1.73e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4989 K00430 - gmx:100797875 488.419