Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4983 ATGGCAGCAATATTGGTGGGAGGAGCTTTCCTCGGTGCATTCCTTAATGTTGTTTTCGACAAGCTTGCTTCACCTGAGGTTGTCAACTTCATCCGAGGCAAGAAGCTTGGCCCTTTACTTGACAGGATGAAGACAACTCTCACAGTGGTCAAAGCTGTGCTCAATGATGCTGAGAAGAAACAGATCAGTGACTCTGATGTCAAAGACTGGCTCGATGAACTCAAACATGTTGTCTACATGGCTGATGACTTGATGGATCATGTTTGTACCAAAGCTGCTGCTGCTGCTGCTGCAGCTGCAACTCTAAAAAAGGTAACTCCTAACTTGTTCTCTCGCCTTTTCAATTCACAACATCAGAAGATGGCTTCAAGATATCGCCCTTTCAATACACAAGATCGGAGGAAGATAGCTACTAGGTTGGAAGAAATAGTTGACAAGCTAGAGCATATCTTAAAACTAAAAGAGAGTCTTGATCTCAAAGAGATTGCAATGGATAATTCCTCATCCAGAGTTCCCTCAACATCTGTGCCAGATAGAAATATATATGGGAGGGATGAAGACAAGGAGGCTATAATCAAGTTATTGTTAGATGATAATAATGAAGGTGAAGATGTATCTGTGATCTCTATTGTGGGCATGGGTGGTGTCGGAAAGACCACTCTAGCCCAAATGATATACAGTGATGACAGTTTGAAGCAAAATTTTGATTTAAAAGGATGGGTTTGTGTTTCTGAAGCATTTGATATCATGGGAGTTACAAAAACTTTAACAGAGGCACTTACTCAACAAGCTTGTCAAATCAATGATCTAAACTCACTTCAAGAAAAATTGGTTGAAAAGCTGAAGGAAAAAAAATTCTTAATTATTTTGGATGATGTTTGGATCGAAGATTATGATAGTTGGAATCTTCTTAGAAAACCTTTGCGATATGGGATGAGGGGAAGTAAAATTCTTGTAACAACCCGTAGTGAAAAGGTTGCATCTGTAGTCCAAACTGTTCAAACTTACAATTTAAGCCAACTATCAAATGAATGTTGTTGGTTAGTATTTGCAAACCATGCTTGTCTTTCCCCAGGATCAGGTGAGAATACAACAGATCTAGAGAAAATTGGCTTGGAGATTGTTAAGAAGTGTAAGGGATTGCCTTTAGCTGCACAATCACTTGGAGGTTTATTGGGAAGAAAGCGTGATATTAAGGATTGGAATAATGTGCTGAATTGTGACATTTGGGAATTATCTGAAAGTAAGATTATTCCATCATTGAGAATTAGCTATCATTATCTCCCTCCTTACTTGAAACGCTGCTTTGTTTACTGTTCATTATACCCAAAAGATTATGAATTTATGAAAAGTGATGTGATCCAGTTGTGGATGGCTGAAGATCTTTTACCACCACCGAAAAAGGGCAAGACTCTAGAAGAAGTTGGTGATGTTTTTTTTGATTATTTAGTTTCAAGCTCATTTTTTCAACGCTCAAGTACTCCGGGGAAGGGGAAGGAGGAGTATTTTGGGATGCATGATCTCATGCATGATTTGGCAACATTTCTTGGCGGGGAATTCTACTTTAGATCAGATGATCTTGGGGATGAAAATACTATTGGTAGCAAAACTCGTCATTTGTCATTCGACAATTTCAGTAGTCCCAACTCAGAAAACTTTGGGGTCTTAGGTAATGCTAAATTCCTAAGAACATTTTTTAGGATTAACGATAAAAAATCTGTATCCGAGAATGACGAGGTACTATGTACTGAGGTGTTGAGTTTTGAGTACTTGAGAGTTTTATCATTTCGTTCCTTTGGAAATCTCTTTGCATTGCCTGATTCTATAGGTGGAATGATCCATTTGCGTTATTTGGATCTCTCCGGGGCAGAAATAGAGTCATTACCAGAGTCATTGTGTAATTTGTATAATCTGCAAACGTTGAAGCTAGAGGATTGTGGTGCGCTTACTATGCTACCTTGTGGCATGCAAAAACTTGTAAACTTGCACTATCTTGGTATTTCTAGAACATGTATAAAGGAGATGCCCAAAGAAATGAGCAAATTAAAGCAGTTGCGACATTTGCCTTACTTCATTGTGGGCAAGCATGAAAAGATCAAGATCAATGAGCTGGGAGGGCTTTCAAATCTTGGTGGGCAGTTTACAATTTACCAATTGGAGAATGTTGAGAATGGTAGTGAAGCGTTGGAGGCAAGGATGATGGATAAGAAGCACATTCAGCATTTAGTACTGGACTGGCCTTCCGATAAGGGTTGTATCGATTCCCAAACCGAAGTTGATATACTTTGCAAGTTAGAGCCTCACCAAGACCTTGAGTCCCTGGAGGTAAAAGGCTACGGAGGTACCAGATACCCTGATTGGATTGGAATGTCTTGTTACCACAATATGACTAGGATAAGGTTGTCTGGTTGCAATAATTGTATTACTCTCCCTTCACTTGGACACCTCCCATCTCTCAAGGACCTGGCAATTTCAGATTTTAATACGTTGGAGACTATTGATGCCAGTTTTTTCAACAAGAATAATGATGACTCTTTGTTGACACCTTTTCCCTCACTTGAATCTCTTGAATTTATAAGGATGCCTTGTTGGGAGGTGTGGAGTTGTTTTGAGCCACATGCTTTTCCTCAGCTTAAGCGTCTAAGAGTACAACATTGTCCAAAATTGAGGGGAGATTTGCCGAGTCACCTCCCTGCTCTAGAAGAACTTGATATTCAAAAGTGCGAGCAACTTACTTGTTCTCTCCCAATGGCTCCCTCCATGCGCCTACTAGTTATAAATGATGTCAATAAAGTAGTATTGCAAGATTTTCCTCTCCTAAAACATTTGACATTGAAAGATTGCTCGTCTATGATGTCATTTCTGGGGGATTGCTTACCTGCATCACTGATGACTCTGGAAATTGAGAGATGTAGAGAACTAGAATTCCCTCAGCAGCAGCAACAGACACTCGAGTTACTAGAGATACTGCAAATACAGAGCAGCTGTGATTCGCTCATGTCTCTCCCACTGGAGGCTTTTCCAAATCTCAAAAAACTATACATCTCAGACTGTGTAAATCTGGAATCTATTTCAGTGTCACACTCACGGGATTTTACTCTTCAAAATCTGAGAGATCTTCATATCTCCAAATGCCCCAATTTAGTATCATTGGCAAGAGAAGGATTGGCTGCGCCCAGAATGACTGGCTTCAGGGTTTCCGGGTGCGACAAGGTAGAGTCATTGCCTCCTCGGATGAATACTCTTCTCCCAAACTTGGTACTTCTTTCGATAGCTTACTGTCCAAGAATTAAGTCGTTTCCTGAAGAAGGTTTGCCGCCTAGCTTGACAACAATTGTGATCAGGAATAGCACGAAACTGCTGAGCTGCCTAGCATGGCCATCCATGGACAAGCTTACCTACCTCCAGATATACGGTCCATGTGATGGGATAAAGTCCATCCCAAAAGAGGGGTTGCTGCCTTCCTCCCTGAAGTCACTATTACTATATGATTTCTCAAGTCTGGAGACGTTGGATTGCAAAGGGCTTCTCCACCTCACCTCCCTCAAACAGTTAACAATTGAGAAATGTCCAAAGCTGGAGAACATGGCGGAAGCAAAGCTTCCTACATCTCTAACTGAACTTGACATCTCTGAATGCCCTTTGCTGGGAGAACAGTGCCGCGTGAAGCACCCTCAAATTTGGCCCAAAATTTCCCACATCCACCGCATTCAGGTTGATTCCAAAGTAATTTCATGA 3738 0.4088 MAAILVGGAFLGAFLNVVFDKLASPEVVNFIRGKKLGPLLDRMKTTLTVVKAVLNDAEKKQISDSDVKDWLDELKHVVYMADDLMDHVCTKAAAAAAAAATLKKVTPNLFSRLFNSQHQKMASRYRPFNTQDRRKIATRLEEIVDKLEHILKLKESLDLKEIAMDNSSSRVPSTSVPDRNIYGRDEDKEAIIKLLLDDNNEGEDVSVISIVGMGGVGKTTLAQMIYSDDSLKQNFDLKGWVCVSEAFDIMGVTKTLTEALTQQACQINDLNSLQEKLVEKLKEKKFLIILDDVWIEDYDSWNLLRKPLRYGMRGSKILVTTRSEKVASVVQTVQTYNLSQLSNECCWLVFANHACLSPGSGENTTDLEKIGLEIVKKCKGLPLAAQSLGGLLGRKRDIKDWNNVLNCDIWELSESKIIPSLRISYHYLPPYLKRCFVYCSLYPKDYEFMKSDVIQLWMAEDLLPPPKKGKTLEEVGDVFFDYLVSSSFFQRSSTPGKGKEEYFGMHDLMHDLATFLGGEFYFRSDDLGDENTIGSKTRHLSFDNFSSPNSENFGVLGNAKFLRTFFRINDKKSVSENDEVLCTEVLSFEYLRVLSFRSFGNLFALPDSIGGMIHLRYLDLSGAEIESLPESLCNLYNLQTLKLEDCGALTMLPCGMQKLVNLHYLGISRTCIKEMPKEMSKLKQLRHLPYFIVGKHEKIKINELGGLSNLGGQFTIYQLENVENGSEALEARMMDKKHIQHLVLDWPSDKGCIDSQTEVDILCKLEPHQDLESLEVKGYGGTRYPDWIGMSCYHNMTRIRLSGCNNCITLPSLGHLPSLKDLAISDFNTLETIDASFFNKNNDDSLLTPFPSLESLEFIRMPCWEVWSCFEPHAFPQLKRLRVQHCPKLRGDLPSHLPALEELDIQKCEQLTCSLPMAPSMRLLVINDVNKVVLQDFPLLKHLTLKDCSSMMSFLGDCLPASLMTLEIERCRELEFPQQQQQTLELLEILQIQSSCDSLMSLPLEAFPNLKKLYISDCVNLESISVSHSRDFTLQNLRDLHISKCPNLVSLAREGLAAPRMTGFRVSGCDKVESLPPRMNTLLPNLVLLSIAYCPRIKSFPEEGLPPSLTTIVIRNSTKLLSCLAWPSMDKLTYLQIYGPCDGIKSIPKEGLLPSSLKSLLLYDFSSLETLDCKGLLHLTSLKQLTIEKCPKLENMAEAKLPTSLTELDISECPLLGEQCRVKHPQIWPKISHIHRIQVDSKVIS* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4983 1245 PANTHER OS05G0414200 PROTEIN 14 895 - -
Lja3g4983 1245 Gene3D Ribonuclease Inhibitor 1118 1239 IPR032675 -
Lja3g4983 1245 Gene3D - 16 126 - -
Lja3g4983 1245 Gene3D Ribonuclease Inhibitor 567 932 IPR032675 -
Lja3g4983 1245 Gene3D - 425 514 IPR036388 -
Lja3g4983 1245 PANTHER DISEASE RESISTANCE PROTEIN RP 14 895 IPR044974 GO:0006952
Lja3g4983 1245 SUPERFAMILY L domain-like 505 943 - -
Lja3g4983 1245 Gene3D Ribonuclease Inhibitor 958 1105 IPR032675 -
Lja3g4983 1245 Pfam NB-ARC domain 185 406 IPR002182 GO:0043531
Lja3g4983 1245 Gene3D - 160 336 IPR027417 -
Lja3g4983 1245 Gene3D - 340 424 IPR042197 -
Lja3g4983 1245 Pfam Rx N-terminal domain 10 96 IPR041118 -
Lja3g4983 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 439 IPR027417 -
Lja3g4983 1245 SUPERFAMILY L domain-like 936 1228 - -
Lja3g4983 1245 PRINTS Disease resistance protein signature 895 911 - -
Lja3g4983 1245 PRINTS Disease resistance protein signature 207 222 - -
Lja3g4983 1245 PRINTS Disease resistance protein signature 280 294 - -
Lja3g4983 1245 PRINTS Disease resistance protein signature 378 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4983 Lja-Chr3 91989302 91996800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4983 605 688 WRKY Transcription Factor Family AT4G12020 36.471 1.68e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4983 - - gmx:106794107 1390.94