Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4964 ATGGGGTTCTCAGCAAAACAATTCTTATCTGAGCTTGTGGTGTTTTCATACTTATGGTTCCCAGTTTCAAGCCTTGGTTCCATGTCTTCAATTGCTGTCTCTTATGGGGATAAAGGTTCAGCCTTTTGTGGTTTGAAATCAGATGGGTCTCATACTGTGGCCTGTAATGGATTCAACTCAGCCATAATTTATGGAACACCACCCCAATTTTCATTCTTTGGTCTAACTGCTGGTGATGGCTTTGTGTGTGGGCTTCTGATGAGTTCAAGCCAACCCTATTGCTGGGGTAGCACTAACTACATAGGGATGGGTGTGCCACAACCTATGGTGAAGGGGGCTCAGTACCTAGAAATCAGTGCTGGGGATTATCACCTCTGTGGGTTGAGGAAACCCTTGACAGGAAGACACAGGAACACTTCTTTTGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTGTTTGATGGGCAGATTCAGTCAATCTCAGCAGGTTCTGAGTTCAATTGTGGCTTGTTTTCTCAAAACAGGACTGTGTTCTGCTGGGGAGATGAGACTAGTAGCCAGATTATGAGTCTGATGCCTCAAGACATGAGATTCCAGAAGCTCTCTGCCGGTGGATATCATGTTTGTGGAATCTTAGAAGGGGTGAATTCTAGGGCTATTTGTTGGGGGAGGAGCTTGGACATGGAGGAGGAAATTTCGTTGGTGCGGTCGGTGAAAGGACAAGGGAACATTGATGTTGCTCCAAAGGATCCTTTGCTTTCTGTGGTGGGAGGAAAGTTTCATGCTTGTGGTGTCAAGAGCTATGATCATGGAGTGATTTGCTGGGGGTATAGTTTGAAAGCAAGCACCCCAGTTCCTAGTGGGATTAAGGTGTTTGAGGTTGTTGCAGGGAACTATTTCACCTGTGGAATACTTGCTGAGGAATCTCTTGAGCCTGTTTGTTGGGGTGTTGGCTTCCCCACCACTCTTCCTATGGCAGTTTCGCCAAGAATGTGCAGGTCCACTCCATGTCCACCTGGTTACTATGAAATTGAACAAGACCAGCAAAAGGGTCTACTTTGCAAGTCCCCAGATTCTCACATTTGCATGCCTTGCACTGGTGTTTGTCCTGATGAAATGTATCAGAAAAGTGAATGCAATCTGAAATTTGATCGAGTTTGTGAATATAATTGTTCTCTTTGTTCATCACCTGAATGCAATTCCAACTGCTCCTCTTCCAATTCCAATGCTTCCACTGGGAAGAAAAATGGTAGATTCTGGGGTCTGCAGTTAACAGTGGTTATTGCTGAGATAGCTTTTGCAGTTTTGATTGTTTGCATTGCTTCCATAACTGCAGTTTTGTATGTTAGATACAAGCTAAGAGGTTGTGAGTGTTCAGCAACAAGGTCAAATGTGAAGAAGCTAAATAGAAGCTCTTCACACCAAAGGGAGAACAGTAAGATCCGCCCTGACATGGAGGAGTTCAAGATTAGAAGGGCTCAGATGTTCCCGTATGAAGAGCTTGAAAGTGCAACTGCTGGATTCAAAGAAGAATCAATTGTAGGGAAAGGAAGCTTTTCTTGTGTGTTCAAGGGGGTTCTCAAAGATGGCACTGTTGTTGCTGTGAAAAGGGCTATAATGTCTCCCAACATGCAGAAAAACTCTAAAGAGTTTCACACTGAGCTTGACTTGCTCTCAAGGCTGAACCATGCTCATTTGCTCAACCTTCTAGGCTACTGTGAGGATGGTGGAGAGAGGCTTCTTGTGTATGAGTACATGGCTCATGGTTCTTTGCATCAGCATTTGCATAGCCCTAACAAAGAGCTGAGAGAGCAGTTAGATTGGGTGAGAAGGGTCACAATTGCGGTCCAAGCAGCGCGAGGAATAGAGTATTTGCACGGCTATGCTTGTCCACCAGTGATTCATAGAGACATCAAATCCTCAAACATACTCATTGATGAAGAACACAATGCTAGAGTTGCTGATTTTGGTTTGTCTTTGCTTGGTCCTGCAGATAGTAGCTCCCCTTTGGCTGAGTTGCCAGCTGGGACTCTTGGTTATCTTGATCCTGAGTACTACAGGCTTCACTATCTTACAACAAAATCTGATGTTTATAGCTTTGGTGTTCTGCTTTTGGAGATTCTTAGTGGAAGAAAAGCAATTGACATGCAATATGAAGAAGGGAACATAGTTCAATGGGCAGTGCCTCTGATCAAATCAGGAGATATAGCCACGATCCTCGACCCGGTTCTGAAACCGCCTTCTGATCTCGATGCCTTGAAAAGGATTGCTAATGTGGCTTGTAAGAGTGTGAGGATGAGAGGGAAAGATAGGCCTTCAATGGACAAAGTGACAACAGCTTTGGAGAGAGCTCTTGCTCAGTTAATGGGAAGTCCTTGCATCGAGCAACCGATTTTGCCGACTGAGGTGGTTTTAGGAAGTAATAGAATGCATAAGAAATCATCTCAGAGGTCTTCAAATAGATCAGCTTCAGAAACTGATGTCGCAGAAAATGAGGATCAGAGGTTTGTTGAGTTTAGAGCACCTTCATGGATAACTTTCCCCAGTGTCACTTCTTCTCAGAGAAGAAAGTCTTCAGGCTCAGAGGCTGAGGTTGATGGGAAAAATAATTCAGAGGTGAGGAACTTTGGTGGCGGTAATGTTGGTGGTGGTGGTGATGTTTTGAGAAGCCTTGAAGAAGAGATTGGTCCTGCTTCTCCTCAAGAGAGACTGTTCTTGCAACACAACTTCTAA 2739 0.444 MGFSAKQFLSELVVFSYLWFPVSSLGSMSSIAVSYGDKGSAFCGLKSDGSHTVACNGFNSAIIYGTPPQFSFFGLTAGDGFVCGLLMSSSQPYCWGSTNYIGMGVPQPMVKGAQYLEISAGDYHLCGLRKPLTGRHRNTSFVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDETSSQIMSLMPQDMRFQKLSAGGYHVCGILEGVNSRAICWGRSLDMEEEISLVRSVKGQGNIDVAPKDPLLSVVGGKFHACGVKSYDHGVICWGYSLKASTPVPSGIKVFEVVAGNYFTCGILAEESLEPVCWGVGFPTTLPMAVSPRMCRSTPCPPGYYEIEQDQQKGLLCKSPDSHICMPCTGVCPDEMYQKSECNLKFDRVCEYNCSLCSSPECNSNCSSSNSNASTGKKNGRFWGLQLTVVIAEIAFAVLIVCIASITAVLYVRYKLRGCECSATRSNVKKLNRSSSHQRENSKIRPDMEEFKIRRAQMFPYEELESATAGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEDGGERLLVYEYMAHGSLHQHLHSPNKELREQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDIATILDPVLKPPSDLDALKRIANVACKSVRMRGKDRPSMDKVTTALERALAQLMGSPCIEQPILPTEVVLGSNRMHKKSSQRSSNRSASETDVAENEDQRFVEFRAPSWITFPSVTSSQRRKSSGSEAEVDGKNNSEVRNFGGGNVGGGGDVLRSLEEEIGPASPQERLFLQHNF* 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4964 912 MobiDBLite consensus disorder prediction 810 827 - -
Lja3g4964 912 Gene3D - 75 339 IPR009091 -
Lja3g4964 912 SUPERFAMILY RCC1/BLIP-II 252 325 IPR009091 -
Lja3g4964 912 Gene3D Transferase(Phosphotransferase) domain 1 588 793 - -
Lja3g4964 912 SMART serkin_6 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4964 912 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4964 912 SUPERFAMILY Protein kinase-like (PK-like) 489 783 IPR011009 -
Lja3g4964 912 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 338 389 IPR001368 GO:0005515
Lja3g4964 912 MobiDBLite consensus disorder prediction 852 890 - -
Lja3g4964 912 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Lja3g4964 912 SUPERFAMILY RCC1/BLIP-II 24 228 IPR009091 -
Lja3g4964 912 Gene3D Phosphorylase Kinase; domain 1 479 587 - -
Lja3g4964 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Lja3g4964 912 Pfam Protein tyrosine and serine/threonine kinase 513 781 IPR001245 GO:0004672|GO:0006468
Lja3g4964 912 MobiDBLite consensus disorder prediction 809 835 - -
Lja3g4964 912 PANTHER RECEPTOR-LIKE KINASE 8 912 - -
Lja3g4964 912 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4964 Lja-Chr3 91838048 91841296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4964 8 912 Receptor kinase-like Gene Family AT3G59420 66.411 0.0 1239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lja3g4964 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4964 - - gmx:100807392 1471.83