Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4949 ATGGATGGGTTTGGTGTTGGGGGTGTTCCCAACACACAAGATCTTAAGCAACCGGAACATGTTAGCAAAGAAGGTGCAGTATTTGATTCATCGCAATATGCATTCTTTGGTAAAGATACTGCTGAGGAATTTGAGTTGGGGGGATTAGAAGAGGAAGATGACAACTTGCCTGCTGTTGGGTTCAATGAGGAGGAGTTTTTCCTCAATACTGAAGAGGCGGATGATGTTAGATCTCTTTCTGATATTGATGATCTCACCACCACATTTTTAAAGCTGAACAAAGTTGTTAGTGGGCCAAGAAGCGCCGGAGTCATTGGTGATCGAGGATCGAGAGAAAATTCTTCTGCTTCTGAATGGTCACAAAGGGATGATATTCCTTACTGGGCTGACCAGCACACTTATGACAGTGAATGTTCTCAGGATGGAAAAAGATGGTCGTCGCATCCCCATTCTTCACTCTCTCATCTACAAGAATCAAAGCCCTTGTACAGAACATCTTCATATCCTGAGCAGCAACGGCAGCAGCAGCACCACCTTCAACATTGCTCTAGTGAACCTTTTTCTAACTGGTTTGATCAGCACTTTTATGATAATGAAACTGCCGAGGATGGGAAGAGATGGTCATCACACCCACATCCCTCCATTGCACACTTACAAGAATCAAAGCCCTTGTACAGGACATCTTCATATCCTGAACAGCAACAGGAGCTTCCTCGTTTTAATAGTGAACCAATTTTGGCACCAAAATCTGCATTTACTTCTTATCCTCCCCCTGGCGGTAGGTCCCAACAGTCTTCTCCACATCACAGTACAGGCCACTTGAACATTCCTTATCATGACGGGGGAGCTCAGATGGCATTATTGTCACAAAACCGTTCTCATTTCTTCAATTCTGCACTACAGTCGAGTGGATCAAAACATGAGTCACATTTTAGTGGAAATTTGCGCCAATTAAGTGCTGGCTCCCCTCTTAATCATCAAATCCAGAATCCATGGGTCAACCATACAGCACTATATCCTGGAGATCATCCAAACCTCCTGAATAATATGCTGCAGCAACAGTTACGCCATCATGATGGATCAGTGTCTTCTCACCTACTGACTCAATTGCAGCAACAGCCACATAGACTGCATCATCCTATTCAGCAATCAGCGGGCTACATGTCAGGTTTCCAGTCCCATTTATTTAATCCCCATCTTTCTTCTGGGTCGTCCATAGTTAACAAATATGAACATATGCTTGGTCTGGGTGATTTTAGAGAGCATAGACCAAAATCAACTCATAAAGGTAGACAGAGTCATCGTTTCTCCCATCATGGTTCTGATGCCAGTAGCCAGAAGAGCGATAGTGGTTCACTACAGTTTAGATCCAAGTATATGACTAGTGATGAAATTGAGAGTATTCTTAAAATGCAGCTTGCAGTAACTCATTGTAATAACCCCTATGTAGATGACTATTATCACCAAGCATGTCTCGCGAAAAAAACTGGGTCCAAGTTGAAGCATTCGTTTTGCCCTACCCAAATAAAGGATCTTTCTTCACGAGCCCGTACCAATAGTGAGCCGCATGGTTTTCTCCAGGTTGATGCTTTAGGGAGGGTTTCATTCTTGGGTATTCGTCAGCCTCGCCCTCTTCTTGAAGTTGATCCTCCTCCAAACTCTTCTACCAGTGCTGGAAGCTCTGAGCGAAATATTTCAGAGAAGCCCCTTGAAAAGGAGCCTTTGTTTGCAGCCAGGGTCACCATTGAGGATGGTCTCTGTCTTCTTCTTGATGTAGATGATATTGATCGTTTTCTACAGTCTAATCAGTTACAAGATGGCGGAACTCAATTAAGACGGAGACGGAAGGTCCTTTTAGAAGGGCTAGCTGCATCACTTCAACTCGTTGACCCACTAGGAAAGAATGGACAGAAAGTTGGGCTTGCTGCTAAGGATGACCTTGTTTTCTTAAGATTAGTATCCCTTCCCAAGGGACGAAAGCTCATAGCAAAGTGTCTTCGGTTGCTTGTTCCTGGTAGTGAGTTCATGCGGATAGTCTGCATGGCTATATTTCGTCATTTAAGATTCTTATTTGGAGGTCTCCCCTCTGATCCTGCAGCTGCAGAGACTACCAGTGACCTTGCTAAGGTTGTTTGTCGATGTGTCCAAGGAATGGATCTCGGTGCTCTTAGTGCGTGTCTTGCAGCAGTGGTCTGTTCCTCAGAGCAGCCTCCTCTACGCCCCCTCGGAAACACTGCTGGGGATGGTGCTTCTCTTATTTTAGTATCTGTTCTTGAGAGAGCTACTGAACTTTTAACTGATCCTCATGCTGCTGCTAGCAACTATAATATAGGTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTTTTTGGCCTTCTCACGAAGTATTGCATGAATAAATACCATAGCATCATGCAATCGCTGGTTACACAAGGGGCACCAAATGTGGCTGTAATTGGATCAGATGCTGCTAAAGCAATTAGTAAGGAAATGCCTGTTGAACTCTTACGTGCAAGTCTTCCTCACACTGATGACCACCAGAGGAAGTTGTTACTGGATTTTGCTCAGCGCTCCGTGCCTGTGGTTGGACTGAGCAGCTATGCCGGCAGCAGTAGCGGTCACGTGAACTCAGAGACAGTGCTAAGTTGA 2652 0.4461 MDGFGVGGVPNTQDLKQPEHVSKEGAVFDSSQYAFFGKDTAEEFELGGLEEEDDNLPAVGFNEEEFFLNTEEADDVRSLSDIDDLTTTFLKLNKVVSGPRSAGVIGDRGSRENSSASEWSQRDDIPYWADQHTYDSECSQDGKRWSSHPHSSLSHLQESKPLYRTSSYPEQQRQQQHHLQHCSSEPFSNWFDQHFYDNETAEDGKRWSSHPHPSIAHLQESKPLYRTSSYPEQQQELPRFNSEPILAPKSAFTSYPPPGGRSQQSSPHHSTGHLNIPYHDGGAQMALLSQNRSHFFNSALQSSGSKHESHFSGNLRQLSAGSPLNHQIQNPWVNHTALYPGDHPNLLNNMLQQQLRHHDGSVSSHLLTQLQQQPHRLHHPIQQSAGYMSGFQSHLFNPHLSSGSSIVNKYEHMLGLGDFREHRPKSTHKGRQSHRFSHHGSDASSQKSDSGSLQFRSKYMTSDEIESILKMQLAVTHCNNPYVDDYYHQACLAKKTGSKLKHSFCPTQIKDLSSRARTNSEPHGFLQVDALGRVSFLGIRQPRPLLEVDPPPNSSTSAGSSERNISEKPLEKEPLFAARVTIEDGLCLLLDVDDIDRFLQSNQLQDGGTQLRRRRKVLLEGLAASLQLVDPLGKNGQKVGLAAKDDLVFLRLVSLPKGRKLIAKCLRLLVPGSEFMRIVCMAIFRHLRFLFGGLPSDPAAAETTSDLAKVVCRCVQGMDLGALSACLAAVVCSSEQPPLRPLGNTAGDGASLILVSVLERATELLTDPHAAASNYNIGNRSFWQASFDEFFGLLTKYCMNKYHSIMQSLVTQGAPNVAVIGSDAAKAISKEMPVELLRASLPHTDDHQRKLLLDFAQRSVPVVGLSSYAGSSSGHVNSETVLS* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4949 883 MobiDBLite consensus disorder prediction 99 122 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 543 567 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 420 453 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 550 564 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 256 272 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 138 157 - -
Lja3g4949 883 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g4949 883 PANTHER PROTEIN PAT1 HOMOLOG 185 862 - -
Lja3g4949 883 PANTHER PROTEIN PAT1 HOMOLOG 11 186 - -
Lja3g4949 883 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 185 862 IPR039900 GO:0000290
Lja3g4949 883 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 11 186 IPR039900 GO:0000290
Lja3g4949 883 MobiDBLite consensus disorder prediction 227 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4949 Lja-Chr3 91666843 91678992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4949 K12617 - gmx:100779096 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4949 3 91666843 91678992 Lja3g4949 3 91666843 91678992 ECH