Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4947 ATGAAGAAGATCAATCTATTACTGAGAAAGTGCAAGAGCTTGTCAAGGCAACTTGGAAGATCTTCATCATATAGTAGCTTGAGGTCCAAATCTACCAAGGAAGACTTGTGGGCAGGACATGGCATAATGCAAGAAGATGAACATTGTGAAACAATATTTGTTGGGAGCACAAGGAAACGGTATGTGATCAGCTCCAAGTACCTGAATCACCCTCTTCTAAATGCTCTGATCAACAAGTCAAAGCAAAATGATAGTGATGAAAATGTTTTGGTGGTCAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGCTAGAAAATGCAGATCCTAAGCTTGGTTCTGAGTCTTTGGAGGAATTGGCTGAACTCTATGTGTTTTAA 384 0.3984 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDLWAGHGIMQEDEHCETIFVGSTRKRYVISSKYLNHPLLNALINKSKQNDSDENVLVVNCEVVLFDHLLWMLENADPKLGSESLEELAELYVF* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4947 127 Pfam Auxin responsive protein 31 106 IPR003676 GO:0009733
Lja3g4947 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 127 IPR003676 GO:0009733
Lja3g4947 127 PANTHER EXPRESSED PROTEIN 3 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4947 Lja-Chr3 91645292 91645675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4947 51 106 Calmodulin-binding Proteins AT4G34750 31.034 2.73e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4947 - - gmx:100500162 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4947 3 91645292 91645675 Lja3g4947 3 91645292 91645675 ECH