Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4927 ATGAAACAGTTGATACGCAAGTTCTCCCGAGTCGCCGACTCACCCAAGTACACGCTCCTCCGATCAGAGTCACGGCGGAGGAGGCGCGTCCCGGAAGGCCATGTGCCGGTGTACGTCGGCGATGAGATGGAACGGTTCGTGGTGAGTGCGGACCTCCTCAACCACCCGGTCTTCATCAACCTTCTCAACCGGTCCGCCCAGGAATACGGTTACGAACAGAAAGGCGGCCTCCGAATCCCCTGCCACGTCGTCGCCTTCCAACGAGTTCTTGAAGCGATCCGACTCGGTCTTGACTCGGACAACCAGTTCATTCATGAGATCCATTTGTAA 330 0.5727 MKQLIRKFSRVADSPKYTLLRSESRRRRRVPEGHVPVYVGDEMERFVVSADLLNHPVFINLLNRSAQEYGYEQKGGLRIPCHVVAFQRVLEAIRLGLDSDNQFIHEIHL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4927 109 Pfam Auxin responsive protein 3 92 IPR003676 GO:0009733
Lja3g4927 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 28 101 IPR003676 GO:0009733
Lja3g4927 109 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 2 25 - -
Lja3g4927 109 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR72 28 101 - -
Lja3g4927 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 25 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4927 Lja-Chr3 91320692 91321164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4927 10 94 Calmodulin-binding Proteins AT3G43120 36.471 3.58e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4927 K14488 - lja:Lj3g3v0424090.1 204.527