Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4921 ATGGCGAGGGAAGAACGCGGTTCAAGTTCCTCTGATTCTTGGATCGTGCGCATGTTTCAGTGCAGGATCTTCAGTTGTTTTACGCCGCCACAGCAGCGTTTAGAGGGATTCAACGACATGGAGATTCTTGATGAGATCGCTGAAGGCGGCTTTGGAAGAGTTTTCCGCTGCCGTGATCGGAGCACCGGCGATATCGTCGCCGTCAAACAAATCGAGCTTCCCGCTGACATTACAAATCGAGCTTCCATCAAAATTAACAGAGAAATCGAGCTTCTTCAACAAGTCAACCACGACAACATTGTGAGGTTGCTGAGACATGTGCAAACAGAGGATAGGAGATATGTGTATCTCGTTTTTGAGCTTCTGGATTGTGATCTTTTTCAGTACATTAGAAGGTCCCGTCGCTTGTTTGTGGAACCATGGCTTAGAAAGAGATTTCTGCACCAAATACTCACTGCAGTGGCGTACTGTCATGCGAATCAGATTCTCCACAGAGATTTGAAACCAAAGAATCTGCTGATCGATGAATCTAGGGACATCATCAAGCTTGCTGATTTTGGCCTCGCCAGACCATTTGGAGATCCAACTGGCCAGTATACTGATAAAATGGGAACTCGCTTTTATACGGCACCTGAAATCTTGTTTGACGGTCCATATTCAACCCCAGCTGATTTGTGGTCTGTGGGCTGCATATTTGGTGAGATGATTATTGGAAATCCAATATTTGAAACTCTTTATGCTTGCCAAAATGAATTAGAGGCGATATTCAGAGTGTTAGGTACCCCTACAGAGGCAACCTGGCCAGGAGTCTCTAGATTTATTGACTATCCAAAATATGGCAAATATGATACAATGAACCTGCCAATGATTTTTGAAGCTGTTGGCCCAGATGGCCTTGATCTTCTTACTAGGATGCTTACCCTGGACCCAGATACTCGGATTTCTGCTGAGGCTGCTCTGGGACATGCTTACTTTAATGGTTTGGACTAG 990 0.4505 MAREERGSSSSDSWIVRMFQCRIFSCFTPPQQRLEGFNDMEILDEIAEGGFGRVFRCRDRSTGDIVAVKQIELPADITNRASIKINREIELLQQVNHDNIVRLLRHVQTEDRRYVYLVFELLDCDLFQYIRRSRRLFVEPWLRKRFLHQILTAVAYCHANQILHRDLKPKNLLIDESRDIIKLADFGLARPFGDPTGQYTDKMGTRFYTAPEILFDGPYSTPADLWSVGCIFGEMIIGNPIFETLYACQNELEAIFRVLGTPTEATWPGVSRFIDYPKYGKYDTMNLPMIFEAVGPDGLDLLTRMLTLDPDTRISAEAALGHAYFNGLD* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4921 329 ProSiteProfiles Protein kinase domain profile. 40 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4921 329 Gene3D Transferase(Phosphotransferase) domain 1 124 329 - -
Lja3g4921 329 SMART serkin_6 40 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4921 329 Pfam Protein kinase domain 42 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4921 329 Gene3D Phosphorylase Kinase; domain 1 38 122 - -
Lja3g4921 329 SUPERFAMILY Protein kinase-like (PK-like) 38 327 IPR011009 -
Lja3g4921 329 PANTHER CYCLIN-DEPENDENT KINASE 36 327 - -
Lja3g4921 329 PANTHER CELL DIVISION PROTEIN KINASE 36 327 - -
Lja3g4921 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4921 Lja-Chr3 91259288 91262389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4921 41 328 Core Cell Cycle Gene Families AT3G48750 45.172 5.53e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lja3g4921 Pkinase 4.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4921 K02206 - gmx:100799974 275.018