Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4879 ATGAATTGCTGGCTGGTAGTGAAACGTTGTGTACATGCTGTGAGGGTTTTTGAGTCTTCTTTTGTGGGAAGAAGGTCTGTTATCAAGGAACGTTTCTCAAAGAAATACAGACATCCAATTTTAGATTCTAAATTAACAATCAAGCGCTTGAATGCGGAGGCTAGGTGCATGACCAAAGCAAGGCGACTTGGGGTTCGTACTCCTGTGCTTTATGCTGTGGATCCTGTGCTGCACACATTAACATTTGAATATGTTGAGGGGCCTTCAGTCAAAGATGTCTTTCTTGAATTTGGATCTCTTGGTGTCAATAAAGAACGGTTAGGCAACATTGCGTCCCAAATTGGCGATGCAATTGGAAAGTTGCATGATGGAGGCCTTGTTCATGGTGATTTAACGACATCAAACATGTTGCTGAAGAATGATGCCAATCAGTTGGTTCTTATTGACTTTGGTTTGAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTCCTGGAAAGAGCTATTCTTTCAATGCATTCTTCATGTGGGAATGTGATGGATCAGGTACTTGCAGCATACCACAAGTCATCAAAGCAGTGGTCATCCACATTGAACAAGCTGGCGCAAGTGCGACAAAGAGGACGAAAGAGCACCATGGTTGGGTGA 660 0.4273 MNCWLVVKRCVHAVRVFESSFVGRRSVIKERFSKKYRHPILDSKLTIKRLNAEARCMTKARRLGVRTPVLYAVDPVLHTLTFEYVEGPSVKDVFLEFGSLGVNKERLGNIASQIGDAIGKLHDGGLVHGDLTTSNMLLKNDANQLVLIDFGLSFTSTLPEDKAVDLYVLERAILSMHSSCGNVMDQVLAAYHKSSKQWSSTLNKLAQVRQRGRKSTMVG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4879 219 Gene3D Phosphorylase Kinase; domain 1 14 85 - -
Lja3g4879 219 TIGRFAM arch_bud32: Kae1-associated kinase Bud32 16 213 IPR022495 GO:0004674
Lja3g4879 219 PANTHER O-SIALOGLYCOPROTEIN ENDOPEPTIDASE 6 219 IPR022495 GO:0004674
Lja3g4879 219 PANTHER EKC/KEOPS COMPLEX SUBUNIT BUD32-LIKE ISOFORM X1 6 219 - -
Lja3g4879 219 SMART serkin_6 4 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4879 219 Gene3D Transferase(Phosphotransferase) domain 1 101 216 - -
Lja3g4879 219 ProSitePatterns Tyrosine protein kinases specific active-site signature. 126 138 IPR008266 GO:0004672|GO:0006468
Lja3g4879 219 ProSiteProfiles Protein kinase domain profile. 1 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4879 219 SUPERFAMILY Protein kinase-like (PK-like) 23 167 IPR011009 -
Lja3g4879 219 Pfam Protein kinase domain 71 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4879 Lja-Chr3 90858958 90861608 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lja3g4879 Pkinase 1.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4879 K08851 - gmx:100813383 367.081