Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4839 ATGGCTGATGTAGCAGGTCTTGCTGAGGCTGCTGGGTCAAGGTTTAGTTCATTGGAGCTCATTGGACAGGGATCATTTGGCGACGTCTATAAAGCGTTTGACAAGGAGCTCAACAAAGAAGTCGCTCTCAAAGTGATTGATTTAGAAGAGTCAGAGGATGAAGTTGAGGACATTCAGAAGGAAATTTCTGTGCTGTCACAATGTCGATCTCAGTACATTACTGAGTATTATGGTTCATTTCTCAATAAAACAAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTCCAGTCAGGTCCTCCACTTGATGAATTGTCGATTGCTTGCATTCTACGGGACTTGCTTCATGCGATTGATTACCTACACAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACCAGGACAATGTCAAGGAGAAAAACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCACTTGGGATTACTGCAATTGAGATGGCAAAAGGGGAGCCACCCCTTGCTGATCTTCATCCTATGAGAGTGCTTTTCATTATACCTCGAGATAATCCGCCACAGCTAGATGAACATTTTTCCCGTTCCATGAAAGAATTTGTTTCTTTATGTTTGAAGAAGGTTCCTACCGAGAGGCCGAGCGCTAAGGAGCTTCTCAAACACCGTTTCATTCGGACTGCCAGAAAAAGTCCGAAGTTCCTGGAAAGAATAAGGGAGCGTCCAAAATACCAAGTGAAGGAAGATCAGGCGGCACCTAGAAATGGCCCGAGAGGGATGGGGGAAGCATCTGATACTGTGAAGGTGGCAGGAGATTTACGAGGTGAAGAAACTAATCAGCCTAGTGATCCGGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACCTTTCATAGTGTTTCACGACCTCCTCACTTTAGAGATAAGAAAAATGAAGTTTCAAATCATCAGCTTAACCAAATAAAAACTCCAGAGAGTGGCTATCAAGGGGGATCTGCTAATAGGAGTGTACTTAATGAGTCACTAGAAACTTCTGGGAAAAACCATGGAATATCCTACCTTGATGAGCATCCAGATAATCACCGTGAGGATGATGAATTGCCTGGGAACGGATCAGGAACTGTTGTTGTTCGGTCTCCGAAGGGATCACCGTCATCAGTATCACTGTTTCGCGACCAAAATTCCCGGTCTAGCAGCATCTATGCTTCTTTTGATGATGCTTCTAATAGCGGAACTATTTCTTTACGTGGTCAGCATGATGAATCTGATACTCCACAGACACCAAGGTCCCCACTGGGACTTAGTAGCAAATATTCAAATGCCTTGCCGGAAGATAGTGCTACAAATCTTGCAGAGGCGAAGGCTGCTATCCAAGGAGGACTAAGGAAAGTTAATGCTCGAGAGAGATTTTCCTTGGGGAAGCTCAATAATGATGTACAGGAAAACAGGAGCGATCAAGTGTCAAACAGCTCTGATTCTCCCAGACCATCCCATGAGTACATTGATGCACAAAAGGATTTTTCAAGGTCACATAACGCCAGTGATGATGAAGAAAATGACAAAATAATGTCATCCTCTGCACCATTATCTATTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTAACGATCCAGAAGGGTCAATCGCGCAAACTGTTATCAATTCACTTGTAAACATGGAGAGGACCTCACCTAGATCTTGTGATGTGCTTATCAAAATGTTGCTTCAGCAGTTAGCAAGCTCAAAGGAGTCTTCATTGAAGGACCTGCAAGAACTAGCAGCTCAAATATTCAACAAGACCAATTCAGCTGAAGAAACCCACCGCAATGCTGAGCCAGATAACCGGAAGAAACAGCAGAATAAGGATCTTCATTCAAATAGCAGTTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAAGCTCACGAGATGTCAATCCAGCTTGA 2112 0.4304 MADVAGLAEAAGSRFSSLELIGQGSFGDVYKAFDKELNKEVALKVIDLEESEDEVEDIQKEISVLSQCRSQYITEYYGSFLNKTKLWIIMEYMAGGSVADLLQSGPPLDELSIACILRDLLHAIDYLHNEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTMSRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRDNPPQLDEHFSRSMKEFVSLCLKKVPTERPSAKELLKHRFIRTARKSPKFLERIRERPKYQVKEDQAAPRNGPRGMGEASDTVKVAGDLRGEETNQPSDPGKTLKSSGWDFSIGGSQGTGTFHSVSRPPHFRDKKNEVSNHQLNQIKTPESGYQGGSANRSVLNESLETSGKNHGISYLDEHPDNHREDDELPGNGSGTVVVRSPKGSPSSVSLFRDQNSRSSSIYASFDDASNSGTISLRGQHDESDTPQTPRSPLGLSSKYSNALPEDSATNLAEAKAAIQGGLRKVNARERFSLGKLNNDVQENRSDQVSNSSDSPRPSHEYIDAQKDFSRSHNASDDEENDKIMSSSAPLSILLIPSLKEAIANDPEGSIAQTVINSLVNMERTSPRSCDVLIKMLLQQLASSKESSLKDLQELAAQIFNKTNSAEETHRNAEPDNRKKQQNKDLHSNSSLSPLARFLLSRWQGQSSRDVNPA* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4839 703 MobiDBLite consensus disorder prediction 322 350 - -
Lja3g4839 703 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 701 - -
Lja3g4839 703 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4839 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lja3g4839 703 CDD STKc_MST3_like 13 287 - -
Lja3g4839 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 701 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 652 681 - -
Lja3g4839 703 Coils Coil 627 658 - -
Lja3g4839 703 Gene3D Transferase(Phosphotransferase) domain 1 12 299 - -
Lja3g4839 703 SUPERFAMILY Protein kinase-like (PK-like) 12 268 IPR011009 -
Lja3g4839 703 MobiDBLite consensus disorder prediction 526 548 - -
Lja3g4839 703 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4839 703 MobiDBLite consensus disorder prediction 278 492 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 401 419 - -
Lja3g4839 703 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4839 703 MobiDBLite consensus disorder prediction 367 399 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 549 573 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 656 674 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 523 573 - -
Lja3g4839 703 MobiDBLite consensus disorder prediction 427 492 - -
Lja3g4839 703 Coils Coil 41 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4839 Lja-Chr3 90419579 90429635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4839 1 700 MAP Kinase Kinase Kinase Kinase AT3G15220 63.481 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lja3g4839 Pkinase 9.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4839 K08838 - gmx:100786501 1144.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4839 3 90419579 90429635 Lja3g4839 3 90419579 90429635 ECH