Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4838 ATGGTGGGCTCAGGAACAACATCAGATAGGAGCAAAGAAGCTGTAGGGATGATGGCCCTTCATGAGGCCCTTAGAAGCGTATGTCTCAACTCAGATTGGAATTACTCTGTCTTCTGGACCATTCGTCCTCGCCCAAGGGTCAGAGGTGGCAGTGGGTGCAAGGTTGGGGATGATAATGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGTGGAAGCGATTTAGACTGCCTGGAAGAGATTGATGGAGAGGATCCAATCAGAAAATCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGAAAGGTTACATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAAAGTGAGCCTGATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCACCTGAATGGATCGATCAGTTTGAGTCAGGCATTCAGACAATTGCTGTAATTCAAGCTGGGCATGGCCTTCTACAACTTGGCTCTTGCAAGATTATTCCTGAAGATCTCCATTTCGTGCTAAGAATGAGGCACACTTTTGAATCTCTACGATATCAATCTGGCTTCTACCTCTCCCAACTTTTCTCTTCAACTAGGAACACTTCCTCTCCTACTTCAGTTCCTTCAAGACCATCCAACATTCCAATTAGCCCAACTCCTTCACTCCTCAACTGGAGTCAGAGGCCTCTTGGTTCTGCTACTTCTATGCTATCCTCACCAGGTTTTCAACATATGGGGTGCCCACAGGCCAAAGATGAGACTCATATGTTTCTCATGCCTCATGCATCTGAAGCTGCAAAAAGAGAAGACATGATGGGGGAGCATGAAAACAACATGAAGTGGCTAAATGGGTATTCCTCCTTCACTGCACCTGATCGAGTGGCTTCTTCATCCTCTTCTATTTCAGTGGATCACCATCAAGCTGTGGAGTATAGGAATTCAGGAGGAGGTATATACACGAATGTCATGGAAACCTTTCTAGAGTGA 1011 0.458 MVGSGTTSDRSKEAVGMMALHEALRSVCLNSDWNYSVFWTIRPRPRVRGGSGCKVGDDNGSLMLMWEDGFCRGSDLDCLEEIDGEDPIRKSFSKMSIQLYNYGEGLMGKVTSDKCHKWVFKEPTESEPDISNYWQSSFDALPPEWIDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLRYQSGFYLSQLFSSTRNTSSPTSVPSRPSNIPISPTPSLLNWSQRPLGSATSMLSSPGFQHMGCPQAKDETHMFLMPHASEAAKREDMMGEHENNMKWLNGYSSFTAPDRVASSSSSISVDHHQAVEYRNSGGGIYTNVMETFLE* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4838 336 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
Lja3g4838 336 MobiDBLite consensus disorder prediction 205 229 - -
Lja3g4838 336 PANTHER GB|AAF34833.1 295 336 IPR044170 -
Lja3g4838 336 PANTHER GB|AAF34833.1 1 298 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4838 Lja-Chr3 90411973 90414715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4838 21 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.020 1.50e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4838 - - lja:Lj1g3v0131270.1 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4838 3 90411973 90414715 Lja3g4838 3 90411973 90414715 ECH