Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4836 ATGACTGGCAGAGAGATTCTCCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCAGGGAAAGGTAAGAGCAAGATGTCGAAGAATATAACTCATGGCTATCATTTGGTAAAAGGAAGATCAGATCATGCCATGGAAGATTATGTTGTTGCTCAATTTAAGACAGTTGATAACAATGAGTTGGGTCTATTTGCAATATTTGATGGCCACTCAGGTCACAATGTACCTGATTACTTGCAGTCTAATTTGTTTGATAATATCTTAAAAGAGCCTGACTTCTGGACTAAACCAGTGGAAGCCGTGAAGAAAGCATATGTTGATACTGATTCTACTATTTTAGAGAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCAGTTACAGCAATATTAATCAACTGTCAGAAGCTAGTAGTGGCCAATCTTGGGGATTCTAGAGCTGTCTTATGCAAAAATGGGGAAGCCATTCCACTGTCAGTGGATCATGAACCAGCCACAGAATCTGAGGATATAAGAAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGACGTTCCACGTGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTCGGGGACAAAAGCTTGAAGAAACACTTGAGCTCAGAACCACATGTGACAGTGGAGCTGATAGATGATGATGCAGAATTTATTATATTAGCCAGTGATGGGTTATGGAAGGTGATGTCAAATCAAGAAGCAGTGGATGCTATCAGAAATGTAAAGGATGCTCGTTCTGCAGCAAAGAACCTTACAGAAGAGGCACTTAAGAGGAACAGCTCAGATGACATCTCTTGCGTTGTTGTGAGACTTCAGTGA 849 0.4158 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKNITHGYHLVKGRSDHAMEDYVVAQFKTVDNNELGLFAIFDGHSGHNVPDYLQSNLFDNILKEPDFWTKPVEAVKKAYVDTDSTILEKSGELGRGGSTAVTAILINCQKLVVANLGDSRAVLCKNGEAIPLSVDHEPATESEDIRNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPHVTVELIDDDAEFIILASDGLWKVMSNQEAVDAIRNVKDARSAAKNLTEEALKRNSSDDISCVVVRLQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4836 282 Coils Coil 244 264 - -
Lja3g4836 282 MobiDBLite consensus disorder prediction 8 30 - -
Lja3g4836 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Lja3g4836 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Lja3g4836 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lja3g4836 282 Pfam Protein phosphatase 2C 45 274 IPR001932 -
Lja3g4836 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Lja3g4836 282 SMART PP2C_4 24 279 IPR001932 -
Lja3g4836 282 Gene3D - 16 282 IPR036457 -
Lja3g4836 282 CDD PP2Cc 35 281 IPR001932 -
Lja3g4836 282 MobiDBLite consensus disorder prediction 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4836 Lja-Chr3 90387812 90391512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4836 1 282 PP2C-type Phosphatase Gene Family AT3G15260 75.087 6.72e-161 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4836 K17506 - gmx:100789914 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4836 3 90387812 90391512 Lja3g4836 3 90387812 90391512 ECH