Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4831 ATGGAGTTTCAAAGACCACTATGTCTCTTGTTCCTTCTCTTTTCTCTTCTCCCAAGCTCCCAAGCCCATAAATTCTACGTTGGTGGAAGCAAAGGTTGGATCCCAAACCCTTCGGAGAGTTACACCCTATGGGCTGGAAGAAACAGGTTCCAAATCAAGGACACCATTGTTTTTAAGTACACCAAGGGTTCAGATTCTGTGTTGGAAGTGAAGAAAGAGGACTTTGACAATTGCAATAAGGCAAACCCCATCAAGAAGTTTGAAGATGGTGACACAGAATTCACGTTTGATCGATCAGGACCATTTTACTTCATCAGTGGAAAAGATGGAAACTGTGAAAAGGGTCAAAAGATGATCCTGGTGGTTATATCACCGCGAGGAACACAACCACCACCGTCGCCGCCACCAAAATCTTCACCTTCACCGTCTCCGAAGGCGAGTCCACCATCTGGGTCACCGCCGACCGCCGGCGAACCCTCTCCGGCAGGAACTCCTCCGTCTGTATTGCCTTCTCCGGCGGGAGCTCCAGTACCGGCCGGTGGACCGTCGGCCGGAACTCCTCCGTCTGCATCAACATCTCCATCTCCATCTCCGGTAAGTGCCCCTCCGGCGGCTTCTCCGGCACCGGGAGCTGAATCACCATCTTCGTCTCCGACAAGCAACTCTCCGGCGGGTGGACCTACGGCGACTTCACCTTCTCCGGCGGGAGACTCACCGGCCGGTGGTCCTCCGGCACCATCTCCGACGACAGGTGATACACCGCCATCAGCTTCCGGTCCAGACGTATCGCCTTCCGGTACTCCGTCGTCGCTTCCGGCGGATACTCCGTCGTCATCATCCAACAACTCGACGGCGCCGCCACCGGGAAACGGTGGTTCATCGGTGGTGCCATCAAGCTTTCTGCATTATTCTGTTACCATTGTTGTTGGTGCTGCGTTACTATACGGCACCGTTTTGGTTTGA 963 0.541 MEFQRPLCLLFLLFSLLPSSQAHKFYVGGSKGWIPNPSESYTLWAGRNRFQIKDTIVFKYTKGSDSVLEVKKEDFDNCNKANPIKKFEDGDTEFTFDRSGPFYFISGKDGNCEKGQKMILVVISPRGTQPPPSPPPKSSPSPSPKASPPSGSPPTAGEPSPAGTPPSVLPSPAGAPVPAGGPSAGTPPSASTSPSPSPVSAPPAASPAPGAESPSSSPTSNSPAGGPTATSPSPAGDSPAGGPPAPSPTTGDTPPSASGPDVSPSGTPSSLPADTPSSSSNNSTAPPPGNGGSSVVPSSFLHYSVTIVVGAALLYGTVLV* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4831 320 Gene3D - 21 125 IPR008972 -
Lja3g4831 320 MobiDBLite consensus disorder prediction 237 253 - -
Lja3g4831 320 MobiDBLite consensus disorder prediction 127 209 - -
Lja3g4831 320 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Lja3g4831 320 PANTHER BLUE COPPER PROTEIN 2 314 IPR039391 GO:0009055
Lja3g4831 320 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Lja3g4831 320 MobiDBLite consensus disorder prediction 254 297 - -
Lja3g4831 320 CDD OsENODL1_like 23 123 IPR041846 -
Lja3g4831 320 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 314 - -
Lja3g4831 320 MobiDBLite consensus disorder prediction 210 235 - -
Lja3g4831 320 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Lja3g4831 320 MobiDBLite consensus disorder prediction 124 297 - -
Lja3g4831 320 PRINTS Proline rich extensin signature 122 138 - -
Lja3g4831 320 PRINTS Proline rich extensin signature 154 175 - -
Lja3g4831 320 PRINTS Proline rich extensin signature 190 207 - -
Lja3g4831 320 PRINTS Proline rich extensin signature 142 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4831 Lja-Chr3 90333853 90335717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4831 3 208 Phytocyanin Superfamily AT5G53870 42.396 5.00e-51 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4831 - - lja:Lj3g3v0429640.1 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4831 3 90333853 90335717 Lja3g4831 3 90333853 90335717 ECH