Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja3g4812 | ATGGGACCTCTTGTGATTTCTTCTTTTCTTTGTTATGTTTTGTTAGTTTTCAGTGCAGTTAGAATCCAAGCTAACGGTTGGCTTAACGCTCATGCAACGTTCTATGGGGCCAATCAAGCTCCCACCAGCCTTGGGGGAGCTTGTGGTTATGATGATACATTTCATGCTGGATTTGGGATCAACACTGCGGCGGTGAGCACTATGCTTTTCAGACGTGGTGAGGCTTGTGGCGCTTGCTACCAAGTGATATGTGACTCCCGGACTGACCCAAAATGGTGTCTTAGAAGCCGCAGTGTGACGGTAACCGCCACCAACTTCTGCCCTCCAAACAACCACGGAGGGTGGTGTGACCCTCCTCACCACCATTTCGACATGTCCATGCCTGCTTTCTTTCGCATTGCACGACAAGGCAATGAAGGCATTGTTCCTGTTCTTTATAGAAGGGTTCCATGCAAAAGAAGAGGGGGAGTAAGGTTCACATTGAAGGGGCAATCCAATTTCAACATGGTGATGATATCCAACATTGGTGGCAGCGGGGATGTGAAGGCTGTATGGATCAGAAGATCCAGAAGTGGAACATGGTTGCCAATGCACAGGAATTGGGGAGCTAATTGGCAAAGCAACGCAGACCTCAGAAACCAGAGACTCTCATTCAAGGTTACCTTGGTTGATGGGAAGACATTGGTGTTTCTCAATGTGGTACCTTCCACATGGAGGTTTGGACAAACATTTTCATCCCGGAATCAGTTCTTTTAG | 756 | 0.4775 | MGPLVISSFLCYVLLVFSAVRIQANGWLNAHATFYGANQAPTSLGGACGYDDTFHAGFGINTAAVSTMLFRRGEACGACYQVICDSRTDPKWCLRSRSVTVTATNFCPPNNHGGWCDPPHHHFDMSMPAFFRIARQGNEGIVPVLYRRVPCKRRGGVRFTLKGQSNFNMVMISNIGGSGDVKAVWIRRSRSGTWLPMHRNWGANWQSNADLRNQRLSFKVTLVDGKTLVFLNVVPSTWRFGQTFSSRNQFF* | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja3g4812 | 251 | Pfam | Lytic transglycolase | 62 | 146 | IPR009009 | - | |
Lja3g4812 | 251 | PANTHER | EXPANSIN-A12 | 8 | 250 | - | - | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 99 | 109 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 203 | 224 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 155 | 167 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 167 | 188 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 57 | 71 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 113 | 130 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 86 | 97 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | PRINTS | Expansin signature | 232 | 248 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | Gene3D | - | 156 | 251 | IPR036749 | - | |
Lja3g4812 | 251 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 45 | 156 | IPR007112 | - | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 26 | 41 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 194 | 208 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 232 | 246 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 44 | 62 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 139 | 155 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PRINTS | Expansin/Lol pI family signature | 66 | 84 | IPR007118 | GO:0005576 | |
Lja3g4812 | 251 | PANTHER | EXPANSIN-A15 | 8 | 250 | IPR002963 | GO:0009664 | |
Lja3g4812 | 251 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 166 | 246 | IPR007117 | - | |
Lja3g4812 | 251 | SUPERFAMILY | PHL pollen allergen | 153 | 246 | IPR036749 | - | |
Lja3g4812 | 251 | Pfam | Expansin C-terminal domain | 157 | 235 | IPR007117 | - | |
Lja3g4812 | 251 | SMART | dpbb_1 | 62 | 146 | IPR007112 | - | |
Lja3g4812 | 251 | SUPERFAMILY | Barwin-like endoglucanases | 11 | 174 | IPR036908 | - | |
Lja3g4812 | 251 | Gene3D | - | 16 | 152 | IPR036908 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja3g4812 | Lja-Chr3 | 90176177 | 90178851 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja3g4812 | 8 | 251 | Expansin Gene Family | AT3G15370 | 60.870 | 3.35e-118 | 337 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja3g4812 | - | - | gmx:106795376 | 473.011 |