Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4786 ATGAAGGAGAAGATAGACGAAGAGGGTTCCAACGGATCCAGTTCCAAGAATATTCTTGATTTTGTGAACCTCTACAAAGATAATTTGGCTCGTGGATCAAAGGTGCAAGAACTTGATTTTTTCAACCTAGGGAAAAACGTGGTGGGTTCATCGTCATCTAGCTGGGCTATTAACGCTGACAACAACGAAGGTAGAGATGAAGACAATGAGGTAAAAACCTCGGAGTCCAAGAAACTCTCTTGCAATTTTTGCATGAGACAATTTTCTTCGGCACAAGCCTTAGGAGGGCATCAAAATGCCCACAAGCCTGAACGTGAACTTGCGAAGCGTAGACAAGAGCTTCACCAAGTTGGTGCTCTTTGGCAGCCTCATTTTCCTTATTACACTTATCCAAGTCTTTCAACACCACCTTATCATAGCTCCTATAACAATGCACTTGGTATTAGGAGGGATTCCATGATTCACAAGCCAACTTATCCTCACACCCCACCAGGTTTCAGGTTTGGTCAAGGGGCCACTTGGTCAGACATGTTAAACATTTCTTCTTTTAATAGACCGAGGGTGGATGGTTTGAATCCTAATACTGGAACTGGGATTCTAGGAAATGGTGGTGCAATTGCATCACCTTTGAAGATAGAAGATCGTGGTAGTAGAACACTTGCAACCACTCGCCAATTTGGAGATTCTTTTGCAAATGCAGCTACAAGATCAAACACAACCCTAGAGAAGTCAAAACCCTTAGAAAAGTCAACTATGGTTACCAACATTGAAGAACCTTCTGATTCTGATGACCCTTCTGGACTTGATTTGTCACTTAAACTTTAA 825 0.4218 MKEKIDEEGSNGSSSKNILDFVNLYKDNLARGSKVQELDFFNLGKNVVGSSSSSWAINADNNEGRDEDNEVKTSESKKLSCNFCMRQFSSAQALGGHQNAHKPERELAKRRQELHQVGALWQPHFPYYTYPSLSTPPYHSSYNNALGIRRDSMIHKPTYPHTPPGFRFGQGATWSDMLNISSFNRPRVDGLNPNTGTGILGNGGAIASPLKIEDRGSRTLATTRQFGDSFANAATRSNTTLEKSKPLEKSTMVTNIEEPSDSDDPSGLDLSLKL* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4786 274 PANTHER ZINC FINGER PROTEIN JAGGED 8 274 IPR045320 GO:0003700
Lja3g4786 274 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Lja3g4786 274 MobiDBLite consensus disorder prediction 231 274 - -
Lja3g4786 274 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Lja3g4786 274 Gene3D Classic Zinc Finger 65 120 - -
Lja3g4786 274 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 8 274 - -
Lja3g4786 274 MobiDBLite consensus disorder prediction 231 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4786 Lja-Chr3 89880740 89881564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4786 73 177 C2H2 Transcription Factor Family AT5G10970 43.396 3.07e-18 80.5