Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4763 ATGGGTTTGTTGGCAGTCACATGGCCGAAGTGTCTAAAAAAGCATCTTCCACTAAAATTAAGGTTTCTTCATACCTTAAAAGACCATCATTTTGACCAAATTTTAATGTCGCCTGCTCTTGCATCTCTGGACTTGCCTGACATTTGGACTCCTAATTCTTCTTGTCAGAGTATTCCAGCATTACATAAAAGCTTTAATCAGCAGACGGCTGAGGTGCTTGATGGAAAATCGATATCAGCGGAAATCAGATCAAAAATAGCTGATGAGGTAAGACACATGAAGAAACACCTAGGAAAAGTTCCTGGATTAGCTGTAATTTTGGTGGGCGAGAGAAGGGATTCTCAAATTTATGTTCGCAACAAGATAATGGCATGTGAGGAAGTTGGAATCAAGTCTTCGGTGACTGAATTACCTGCTGATTGTGCAGAAACAGATGTTCAAAATGCTGTCATGAGATTTAACAAGGATCCTTCAATTCATGGTATTCTTGTGCAACTTCCTCTACCACAACATCTAAATGAGGAAAAAGTTTTGGATGCTCTAAGCCTAGAAAAAGATGTAGATGGTTTTCATCCTCTGAATATGGGGAATCTTGCCATAAGAGGAAGGGAGCCACTGTTTATTCCCTGCACTCCAAAGGGTTGCATTGAGTTATTGATCAGATCTGGAGTTAAGATTATGGGGAAGAAAGCCGTGGTGATTGGGAGAAGTAATATTGTTGGATTGCCAGCATCCTTGCTATTGCAGAGACACCATGCAACAGTCACGGTTGTGCATGCATTTACAGAAAACCCTGAACAGATAACATCAAAAGCGGATATTGTAGTTTCAGCTGCTGGGGTGCCCAATTTGGTCCGTGGGAACTGGATAAAGAATGGTGCAACTGTGATTGATGTTGGAACAATTCCTGTTGAGGACCCTAGCTGCGAGGATGGGTATCGTCTAGTAGGTGATGTATGCTTTGAAGAAGCTGTAAAGGTGGCATCCCTTGTTACTCCTGTGCCGGGTGGGGTTGGACCTATGACGGTTGCTATGCTGCTATTGAACACGCTAACTTCTGCAAAGCGCATGCTTAATTTTACTTGA 1086 0.4236 MGLLAVTWPKCLKKHLPLKLRFLHTLKDHHFDQILMSPALASLDLPDIWTPNSSCQSIPALHKSFNQQTAEVLDGKSISAEIRSKIADEVRHMKKHLGKVPGLAVILVGERRDSQIYVRNKIMACEEVGIKSSVTELPADCAETDVQNAVMRFNKDPSIHGILVQLPLPQHLNEEKVLDALSLEKDVDGFHPLNMGNLAIRGREPLFIPCTPKGCIELLIRSGVKIMGKKAVVIGRSNIVGLPASLLLQRHHATVTVVHAFTENPEQITSKADIVVSAAGVPNLVRGNWIKNGATVIDVGTIPVEDPSCEDGYRLVGDVCFEEAVKVASLVTPVPGGVGPMTVAMLLLNTLTSAKRMLNFT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 273 302 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 224 244 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 314 330 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 101 123 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 177 198 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 142 169 IPR000672 GO:0004488
Lja3g4763 361 PRINTS Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 331 349 IPR000672 GO:0004488
Lja3g4763 361 CDD NAD_bind_m-THF_DH_Cyclohyd 184 355 IPR020631 GO:0004488
Lja3g4763 361 ProSitePatterns Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 335 343 IPR020867 GO:0003824
Lja3g4763 361 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 70 189 IPR046346 -
Lja3g4763 361 Hamap Bifunctional protein FolD [folD]. 70 358 IPR000672 GO:0004488
Lja3g4763 361 Gene3D Leucine Dehydrogenase, chain A, domain 1 75 351 - -
Lja3g4763 361 PANTHER BIFUNCTIONAL PROTEIN FOLD 1, MITOCHONDRIAL 51 361 - -
Lja3g4763 361 PANTHER C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED 51 361 - -
Lja3g4763 361 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 191 356 IPR020631 GO:0004488
Lja3g4763 361 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 73 188 IPR020630 GO:0004488
Lja3g4763 361 Gene3D - 73 334 - -
Lja3g4763 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 190 355 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4763 Lja-Chr3 89724776 89729461 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4763 - - gmx:100791604 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3166 1 38787777 38793136 Lja3g4763 3 89724776 89729461 PCT