Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4757 ATGTCGTTGAACATGAAAACCCTAACCCAAGCATTGGCCAAGGCATCCGCGGTCATCGAGAAAAAGGTGCAGACGACGGTGCAAGAGGTCACGGGCCCAAAGCCCCTTCAGGACTACGAGATCCTCGACCAGATCGGCTCAGCAGGACCCGGCCTGGCATGGAGGTTGTACTCCGGCCGGGCTCGTGATCCGTCGCGGCAGCACCAGTACCCTGTCGTGTGCGTGTGGGTGTTGGATAAGCGGGTTCTCTCCGAGGCGCGAATGCGCGCCGGGCTCACCAAGGCGGCCGAGGATTCGTTTTTGGATTTGATTCGGGCGGATGCGGCGAAGCTCGTGCGGCTCAGGCATCCTGGTGTGGTTCATGTGGTGCAGGCGCTCGACGAGAACAAGAATGCGATGGCTATGGTGACGGAACCTTTGTTTGCTTCTGTTGCTAATACTCTTGGCAATGTTGAGAATATTGCAAATGTTCCTAAGGATCTTAGGGGAATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCAGAATCCCTTGATTTTCTACACAACCATGCTCGTCTTATTCATCGAGCTATATCACCGGAGAATATTTTTATTACCTTGAGCGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTACTTCTGAGAACTCGGGTGACTCATCTCATCTGCAAGCCTTCCATTATGCTGAGTATGATGTTGAAGATTCTATTTTGCCCCTTCAGCCATCACTTAATTACACAGCTCCTGAGCTGGTGAGAAGCACTGGGTCTTCACCTGGGTCCTCTTCCGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCTCGCAAGTCTTTGTTTGACTGCCACAACAATGTGAAAATGTACATGAATACCCTGACTTACTTATCCAGTGATGCTTTCTCATCTATCCCGTCGGAACTAGTTCCTGACTTACAAAGGATGCTCTCTCAAAATGAGTCTTTCAGGCCAAATGCGATGGATTTTACAGGCTCGCCATTTTTCCGAAATGATACTAGATTGCGTGCTCTGCGCTTCCTTGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTGAAAGCACTGTCAGATATGTGGAAGGATTTTGATGCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATTTGGTGATACAGCCGATGATTCTACCAATGGTCCTAACCATTGCAGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCTCTAGTCCCTGTCTTGAGCACTGCAGCTGGTGACACATTGTTACTACTTGTGAAGCATGCTGAACTTATTATAAACAAGACTAGTCAAGAGCATTTAATTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATAATGATGCACGATTACAAGAAGAGGTCCTGAAAAAATCTGTATCCCTAGCCAAGCAACTTGATCCTCAGCTGGTTACGCAAGTGATTTTGCCCCGAGTTCATGGACTAGCACTTAAAACGACAATTGCTGCGGTTAGAGTCAATGCTTTGCTGTGTCTAGGCGACATGGTTAACCGACTTGATAAACATGCTGTCCTGGATATCTTGCACACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCAACCCTTATGTGTACTCTTGGGGTTGCAAATTCTATTTTTAAGCGGCATGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCACTGCTTATGCCCCTTCTGACTGCTCAACAGCTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCAAAAGATTGAAGAGAAACGAGGAGTGGCTGTGACTGATTCTGGAATCCCAGCTGTGAAACTATCTCCTGCGGTTAATGGCCTTCAAACTGAAGCCCTGAGGACAAGCAGCAGCACTGTTGCTTCAACAACAAAAAGCAACCCCTCTTGGGATGAAGATTGGGGTCCCAAAACAAAAGGAACTGCCTCTTCTGTCCAGAATTCTAATGACAGACCCAGTCAGTCTGTACCACGCAATTCTTTGGGTCAAGAAACATCTTTACAAAAGCATTTACCCTTATCGGGTATATCTGATCAGCAGACAACCAAGTCATGTCCCTCAGTAGATGTAGAATGGCCGCCTCGATCAGTTGGTGTTACCTCACAATTTGGTAATGCTGAAAAGCAAACAACGTCAGCAGGAACTCCACCCACATCTACTCACAAAGTCGATGATCCTTTCGCAGATTGGCCTCCACGTCCTAGTGGCTCATTATCTGGTGGATCTGGAATTTCTAACAATGGTACTTTAGGAATGCCACCACTAAACAAACAAGGGTTTAATTCAATGACAAGCAATTCAAGCAATTTGGGTTTCCAAACTAGCAACCTCTGGTCTGTTAATCCCCAAAGTTCTGCAGAGTCTGCTAGTTTGAACCTAAGGAATGCCAGTTCAGCCACTGGCAACTTGAACAGCAGCCTTGAACCTCAGAATTCTCTTGGGTTCCTAAAACAAAGTCATGCTCTTCCAGCATCGAATGTTTCCAATAATAACTTCAAGTCAACAGATATTGGATCAATATTTTCTTCCAACAAGAATGATCAGATTGCACCTAAACTTGCGCCACCCCCTTCATCCACAGTGGGCAGAGGACGAGGAAGAGGGAGGGGAGCTACGTCAACCACTCAACGCTCTAATACCTCGTCACGTGCTGAGCAGCCACCCCTTTTGGATCTGTTGGGGTAG 2784 0.4648 MSLNMKTLTQALAKASAVIEKKVQTTVQEVTGPKPLQDYEILDQIGSAGPGLAWRLYSGRARDPSRQHQYPVVCVWVLDKRVLSEARMRAGLTKAAEDSFLDLIRADAAKLVRLRHPGVVHVVQALDENKNAMAMVTEPLFASVANTLGNVENIANVPKDLRGMEMGLLEVKHGLLQIAESLDFLHNHARLIHRAISPENIFITLSGAWKLGGFGFAISTSENSGDSSHLQAFHYAEYDVEDSILPLQPSLNYTAPELVRSTGSSPGSSSDIFSFGCLAYHLIARKSLFDCHNNVKMYMNTLTYLSSDAFSSIPSELVPDLQRMLSQNESFRPNAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDARVLRYKVLPPLCAELRNLVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSTAAGDTLLLLVKHAELIINKTSQEHLISHVLPMIVRAYDDNDARLQEEVLKKSVSLAKQLDPQLVTQVILPRVHGLALKTTIAAVRVNALLCLGDMVNRLDKHAVLDILHTIQRCTAVDRSPPTLMCTLGVANSIFKRHGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLQKIEEKRGVAVTDSGIPAVKLSPAVNGLQTEALRTSSSTVASTTKSNPSWDEDWGPKTKGTASSVQNSNDRPSQSVPRNSLGQETSLQKHLPLSGISDQQTTKSCPSVDVEWPPRSVGVTSQFGNAEKQTTSAGTPPTSTHKVDDPFADWPPRPSGSLSGGSGISNNGTLGMPPLNKQGFNSMTSNSSNLGFQTSNLWSVNPQSSAESASLNLRNASSATGNLNSSLEPQNSLGFLKQSHALPASNVSNNNFKSTDIGSIFSSNKNDQIAPKLAPPPSSTVGRGRGRGRGATSTTQRSNTSSRAEQPPLLDLLG* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4757 927 MobiDBLite consensus disorder prediction 645 800 - -
Lja3g4757 927 MobiDBLite consensus disorder prediction 902 919 - -
Lja3g4757 927 Gene3D Transferase(Phosphotransferase) domain 1 153 347 - -
Lja3g4757 927 MobiDBLite consensus disorder prediction 731 752 - -
Lja3g4757 927 MobiDBLite consensus disorder prediction 645 664 - -
Lja3g4757 927 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 8 926 - -
Lja3g4757 927 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Lja3g4757 927 MobiDBLite consensus disorder prediction 876 927 - -
Lja3g4757 927 Gene3D - 348 621 IPR011989 -
Lja3g4757 927 SUPERFAMILY ARM repeat 314 607 IPR016024 -
Lja3g4757 927 MobiDBLite consensus disorder prediction 672 720 - -
Lja3g4757 927 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 8 926 - -
Lja3g4757 927 MobiDBLite consensus disorder prediction 771 800 - -
Lja3g4757 927 Gene3D Phosphorylase Kinase; domain 1 36 138 - -
Lja3g4757 927 Pfam Protein kinase domain 106 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4757 927 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4757 927 CDD PK_SCY1_like 45 346 - -
Lja3g4757 927 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4757 72 335 AGC Kinase Gene Family AT3G10540 24.151 8.30e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Lja3g4757 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4757 K17541 - gmx:100796211 1481.08