Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4741 ATGGACGCCACTCACACAATGTTTTGTGACAATGATCTGGTTAACCCTCTAAGCTCCATGGGCATGCAAGTTTCCTGCATTCTTGTTGTCTCACACGTCTTCAACGTGGTGCTTAGAACAGTTGGTCAACCTGGACCCATTGCACAAATTCTGGCAGGGTTGGTACTAGGTCCAATGTCTCATATAGAGTATATACAAGCAACATTTTTTCCTGCAAGTTCCATAAATTACTATGAAGTTGTGAGCTTTTTCTGTAGAATACATTTCATGTTCTTATTTGGGTTAGAGATGAACATTCACTACACAATGCGCAATCTACGCTTGGTTAGCTTGGTAGCCTGTGGTGGTGCCCTAATGGGTGGTGTTTTTGGTCTATCTGTGTCCTTTTATTTGTATCAAGAGTTAGACACAGATGCCCCAATATATTATTTTTGTATGATTATTATGCTAGTGGTTTCATACACAAGCTCTCCCATGGTGATTCGTTTGGCAGCGGAATTGAGGTTTGCTGCATCGGGTATTGGGCGAATCGCGGTGTCCTCTGCACTGATTACAGAAATCGGTTGCTTGGTGTTCTTCAATGTGATGGTTAATTGGAAAAGAGAAAACCACATTTCAGCTGGTTTTGGTTGCATTATCATTACAGCCCTGGTGATTTTGATAAACAGGTACTTAGCTGTTTGGTTAAACACACGGAATCGGAACCAGAAGTACCTTAAGGCACCTGAGCTGTTACTCATCCTGTTTCTGCTTCTGGCGAGCTCAATGATTATTGAGATTTGGGGTTACAATAGTATCATTAGTTGCTTCATCATTGGCTTGATGTTTCCTAAGGAAGGCAAAACGGCTAGAACATTGGTGCATAAGCTTGGTTATTCTATTTATAACTTTGTGCTTCCAGTGTACTTTGGCTACTTGGGTTTGCAATGTGACCTCATATATGTCTTCCGGAGCTTGAACCGGATGGCGAACACGGCCATATTGATCTTGTTGAGCATTGGCAGCAAGCTTGGAGGCACTCTTGTGGTTTGCCGTTCCCTTCGGATTCCCACAAGTGAAGGAATTTTTCTTGGCTTCATATTGAACACTAGAGGTTATGCTGATCTGCTATTCATTGGTGCAGCAGCAAAGCAAATCATTACGTTTGATTCAGAGGCTTACAATGTGTTGTTAGTATCAATAGTTTTGAACACGATAATATCAGGAATAATTGTGGCTTTTCTAGCAAGGGGGGAAGAGAAAATGTTTGCAAACAACCACACTGCAATTGAGCCTCAGCAAATGGAGGATGAGCTTCGAATTCTTGCCTGTGTATATGATCCGCGTCAAGTATCTGCTATACTCGCGACAGTGCTAGCAATGCACGGCACGAGAGCATCACCATCCACCACTTATTTGATGCACCTAATAGAGCTTGTGAAGAAGATCAAGTCTAACTTATTATACCATGAAAAAGAAAACGCTGACATTAGCGACGATGATGACTATGGTGGCAATGATGTTGTGGAAATCAATAATGCTTTAGATGCCTTCACTGCAGACACAGCGATTTTGGTCCACCAAAGAAGGGCAGTGTCTCCTTTCCCAAGTTTGTATGAAGATGTTTGCAATGAAGCAGAGGATCTTCAAGTGTCCATCATTCTACTTCCCTTCCACAAGCATCAGCGAATCGATGGAAAATTGGAAAGTGGGAAGGAAGGTATAAGGATTACCAATCAGAAGGTTCTTAGACATGCTCCTTGTTCTGTTGGTGTCATTGTAGAAAGAGGACTTGCAAAGGTCCCTGGTTTCTCACAGTTAGTTGCATCTGAAGCCATACAAAATATTGCAACACTTTTCTTCGGAGGCCCGGATGATCGTGAAGCTATCGCTTGGAGCCTACGCATTTCCAAAAGCCCTCGAGTTAACTTAACGATCATCAGATTTCTGCTGTCTTCTTCTTCATCATCACAGAACGAACCAATTGAAAGTGGACAATCTGAGGACAAAGAAATTCTAATGTCCTTGTCTGGGGAAGAGACAGTGAATGAGATTGACAACACCTTTATGGTTGATTTCTATAATAGGTATGTAACCTCAGGCCAAATTGGATATGTGGAGAAGTTTGTGAAGGATGGAGCAGAAACAGTGGACTCTTTGAAAGAGATAGGGGACATGTACTCTTTGTTTATAGTAGGAAAGGGTGGTAGAGGAAATAGTTCATTAACAATAGGTATGAGTGATTGGGAGGAGTGTCCAGAACTTGGAACAGTTGGTGATGTCTTGGCTTCTTCAGACTTTGATATTCATGGCTCAGTTTTGGTCATTCAACAGCATAGAGATGCCAAGAAAGGCCTAATGCACGATTAG 2349 0.4206 MDATHTMFCDNDLVNPLSSMGMQVSCILVVSHVFNVVLRTVGQPGPIAQILAGLVLGPMSHIEYIQATFFPASSINYYEVVSFFCRIHFMFLFGLEMNIHYTMRNLRLVSLVACGGALMGGVFGLSVSFYLYQELDTDAPIYYFCMIIMLVVSYTSSPMVIRLAAELRFAASGIGRIAVSSALITEIGCLVFFNVMVNWKRENHISAGFGCIIITALVILINRYLAVWLNTRNRNQKYLKAPELLLILFLLLASSMIIEIWGYNSIISCFIIGLMFPKEGKTARTLVHKLGYSIYNFVLPVYFGYLGLQCDLIYVFRSLNRMANTAILILLSIGSKLGGTLVVCRSLRIPTSEGIFLGFILNTRGYADLLFIGAAAKQIITFDSEAYNVLLVSIVLNTIISGIIVAFLARGEEKMFANNHTAIEPQQMEDELRILACVYDPRQVSAILATVLAMHGTRASPSTTYLMHLIELVKKIKSNLLYHEKENADISDDDDYGGNDVVEINNALDAFTADTAILVHQRRAVSPFPSLYEDVCNEAEDLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIVERGLAKVPGFSQLVASEAIQNIATLFFGGPDDREAIAWSLRISKSPRVNLTIIRFLLSSSSSSQNEPIESGQSEDKEILMSLSGEETVNEIDNTFMVDFYNRYVTSGQIGYVEKFVKDGAETVDSLKEIGDMYSLFIVGKGGRGNSSLTIGMSDWEECPELGTVGDVLASSDFDIHGSVLVIQQHRDAKKGLMHD* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4741 782 Gene3D - 19 417 IPR038770 -
Lja3g4741 782 Pfam Sodium/hydrogen exchanger family 27 409 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja3g4741 782 PANTHER CATION/H(+) ANTIPORTER 1 21 772 - -
Lja3g4741 782 PANTHER CATION/H + ANTIPORTER 21 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4741 Lja-Chr3 89461329 89464096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4741 7 775 Antiporter Super Family AT1G16380 40.407 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4741 - - gmx:100804522 1382.85