Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4726 ATGGCAAAGTCCAAGAATAATGCAAAGAAGTTGTCATACATCTCAGTTCCATCTCAGATCATCAACTCCATCTCATCTTCTTCTCTTGAATCTCTGCTTGAATCTCCCAAGAAATCTGCAAGAAGCTCCAAGTTTTTCATCTTCATCTTCACAAAGTTCAGGAGCTCAAGAAGACTATTGTTCTTTTTCACTCTCTTTGTCCTTGGTTTTCTCAGCATGCTCAAGCTTGGATTCAACATGGATATCCCATTTTCTCCCTACCCATGTGCCACAATGCAGCCAGACCTCTCAAAATCCGAGCTTGGTGTTGTTGTTGCCTCATCACAGAAAGATGAGATTTTGAAAGCTTCTAGTGTGCCCCATTTGCAGAAAGATGAGGTTTTGGTTTCCAGTTTGCAGTTGCAAGCTAAAGGGCCAAGTGGGGTGGGGAAAGAGGATCAGGAAAAAGATGAGGATGTTGAGAAGAGTGGGTTTTGGAAGCAACCGGATGGGTTGGGTTACAAGCCTTGCTTGGATTTCAGCAGGGATTATAGGAGAGCAAGTGAAGGGGTTGTGAATAACAGGAGAAAGTATCTCATGGTGGTGGTTTCTGGAGGGATGAATCAGCAGAAGAATCAGATTGTTGATGCTGTTGTCATTGCTAGGATTCTTGGGGCTGCTTTGGTTGTCCCTATTTTGCAAGTCAACGTTATCTGGGGTGATGAAAGTGAGTTTGGTGATATATTTGATTTGGAGCACTTCAAGAGTGTTCTTGCCAATGATGTGCGAGTGGTTTCAGCATTGCCATCAACGCACCTGATGACAAAGCCAGTAGAGGGAAGCCCTCCCCTTCATGTCACTCCTAGTTGGATCCGTTCTCGCTATCTCAGAAGATTCACCAGAGAAGGTGTTTTGCTTCTACGCGGTTTGGATTCAAGGCTGACTAAGGATCTTCCTTCTGATCTTCAGAAGCTTCGATGCAAGGTTGCTTTTAGTGCATTGAAGTTTGCAAAGCCAGTTCAGGAACTTGGTAACAAGTTTGCGGATAGAATGAAAAGCAAAGGACCCTACCTTGCCCTTCATCTAAGAATGGAGAAGGATGTGTGGGTAAGGACAGGTTGTCTACCTGGTCTGAGCCCTGAGTTTGATGAGATTGTAAAGAATGAGAGGATACAACGGCCGGAGCTCTTGACAGGCAGATCAAACATGACTTATCATGAAAGGAAGCTGGCTGGCCTCTGCCCCTTGAATGCTGTTGATGTTACTAGGCTGCTTAAAGGTCTTGGTGCTCCAAAAAGTGCAAGAATTTATTGGGCGGGAGGACAACCATTGGGTGGAAAAGAGGCCTTGAATCCATTAATCCATGAGTTTCCACATCTTTACAACAAGGAAGATCTTGCCTTGCCTGGAGAACTGGAACCATTTGCAAATAAAGCTTCTCTAATGGCTGCCATAGATTACATAGTCTCAGAGAAAAGCGATGTTTTCATGCCATCTCACGGAGGAAACATGGGCCATGCAATTCAGGGTCACCGGGCCTATGCAGGGCACAAGAAATATATAACCCCAAACAAAAGACAGATGCTTCCCTATTTTCTGAATTCATCCCTCCCTGAAGCAGAGTTCAACAGGGTTATCAAGGAATTGCACCAGAATTCAATAGGGCAGCCCGAACTTAGGACTAGCCGGGTCGGGAGGGATGTCACCAAGTATCCTGTCCCTGAGTGCATGTGCAACGACTCACATGATCATTCCCAATAG 1740 0.4517 MAKSKNNAKKLSYISVPSQIINSISSSSLESLLESPKKSARSSKFFIFIFTKFRSSRRLLFFFTLFVLGFLSMLKLGFNMDIPFSPYPCATMQPDLSKSELGVVVASSQKDEILKASSVPHLQKDEVLVSSLQLQAKGPSGVGKEDQEKDEDVEKSGFWKQPDGLGYKPCLDFSRDYRRASEGVVNNRRKYLMVVVSGGMNQQKNQIVDAVVIARILGAALVVPILQVNVIWGDESEFGDIFDLEHFKSVLANDVRVVSALPSTHLMTKPVEGSPPLHVTPSWIRSRYLRRFTREGVLLLRGLDSRLTKDLPSDLQKLRCKVAFSALKFAKPVQELGNKFADRMKSKGPYLALHLRMEKDVWVRTGCLPGLSPEFDEIVKNERIQRPELLTGRSNMTYHERKLAGLCPLNAVDVTRLLKGLGAPKSARIYWAGGQPLGGKEALNPLIHEFPHLYNKEDLALPGELEPFANKASLMAAIDYIVSEKSDVFMPSHGGNMGHAIQGHRAYAGHKKYITPNKRQMLPYFLNSSLPEAEFNRVIKELHQNSIGQPELRTSRVGRDVTKYPVPECMCNDSHDHSQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4726 579 PANTHER OS02G0726500 PROTEIN-RELATED 12 578 - -
Lja3g4726 579 CDD O-FucT_plant 191 512 IPR024709 -
Lja3g4726 579 MobiDBLite consensus disorder prediction 142 158 - -
Lja3g4726 579 MobiDBLite consensus disorder prediction 137 160 - -
Lja3g4726 579 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 12 578 - -
Lja3g4726 579 PIRSF UCP009360 20 575 IPR024709 -
Lja3g4726 579 Pfam GDP-fucose protein O-fucosyltransferase 191 507 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4726 Lja-Chr3 89361569 89365145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4726 10 575 Miscellaneous Gene Families AT3G07900 63.778 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4726 - - lja:Lj3g3v0464880.1 877.47