Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4723 ATGAACATGAGAAGAGAGAAGGAGAAGACTCAAAGAAGAAGGGATGAATCTGAGCTAATAGAGAAGATTGTTAAAGACACATTCACTAAATTAGCTCCTGTGCCTTTTCAAATCCCCCACGTAGTTGGCCTTGATGCTCACTTCGAATGTGTGATGTCAGTTTTAGATATTGAGTCTAAAGATACCGTTGGCATGTTGGGAATTTATGGATCTGGTGGAATTGGCAAAACCACGTTTGCCGCCTATCTGTATGACAACATCAGGCATAAATTTGAAGCAGCAACATTTCTTATCCATGATAGAGAAAGAACAAACAGAAGCATTGTAGAGGGCCTAGATGATCTCCAGAAGACACTTCTATCTCAGATGGGAGAGGAAGCAAAAACCTTGGTGGGTAGTACATTAGATAGATGCAATGAAATCAAACTGAGGCTTCGCAAGAGTAGAGTTCTTCTGGTTTTGGATGATGTTGATAATAAAGTAATATTGAAATCACTGGCTGGAGGATGTGATTGGTTTGGTCCAGGTAGCAGGATCATTATAACAACAAGGGATGCAGCTGTGCTAGACAATCATGATGTTGAAATTAAGAAATACAAATTGGAGGAGCTAAATGACCATGACTCTCTTGAACTTTTTTGTTCGAAAGCCTTTGGTATGAGCAGACCTGCAGAAAACTTTGAAAACATGTCAAGTCGTGCTGTAAGTTATGCAAAGGGTATTCCATTGGCTTTACGAGTAATTGGTTCCAATTTGAAGGATCGAAGCATAGAGGAATGGGAAATTGAATTGGGCAAATATAGGAAGGTTCCAGATGCTGAGATTCAAAGGGTACTAGAAATAAGCTACGATAGTCTATCTGAACTGGATCAGAGAATTTTCTTGGACATTGCTTGTTTCTTCATAAGGGAGAAATGGATATATGTTCAAAGGATATTAGAGGCTTGTGATTTCAGTCCAAGTTTTCGAGTCTTTGATTCTAAATGCCTCATATCTATTGATGAAAATGGTTGCTTGGAGATGCATGATCTAATAAGAGACATGGGTAGAGAGATTGTTAGGAAGAAATCACCGTCAAACCCTGGTGAACGGAGCAGACTATGGTCTTGTGAAGACATTCTTCAAGTACTTCAAGAAAACTCAGGAGGCAGCAAAATTGAAGGAATAATGCTTCATCCCCCTATACATGAAGAAATAGATCATTGGACTAATACTTCCTTTGAGAAGATGAGCAATCTCAGAATTCTTATTGTTCGGAATGCCACATTTTCAACTGGACCTAGTTATCTGCCGAATAGTTTACGCCTACTTGACTGGATGGGATTCCCATCGAAGTCTCTTCCAACTGATTTTCATCCCGAGAGAATTGTTGACTTCAAGTTATCTTATAGTTCTCTAATATTTGCAGAGCCACTTCAGGCATTTAAAGATTTGATATTCATGAATATCTCCCAATGTCAATCCATAACTCACATACCAAACCTGTCTGGAGCAAAAAGCTTAAGAGCATTGACACTTGACAGATGTTATAAATTGGAAGGGTTTGATAAATCCTTTGGATTATACATGACAAATCTTGTGTATTTAAGTGCATCGGAGTGCACCATGCTAAAAAGTTTTGTGCCAACAATGTACTTTCCATCTCTCGAAGTTCTTTCATTTAACTTCTGCACATCACTTGAAAGCTTCCCTGACGTAAAACGGAAGATGGATAAGCTGTTAAAGATTCACCTGAAAAATACTTCTATTAAAGAGTTCCCGAACTCCATTCCTAAACTTACTGGGCTTGAGTATGTAGACCTGTCAAATTGTGAAGGGGTCAGAGATTTATCAAGAAGCTTTTTATTGTTGCCAAAACTTGTCACGTTAAAAGTTGATGGATGTTCTCAACTTGGACAATCATTTAAAAAGTTCAAAGAGAGCCTTTCAGTGGGAAATCCTTGCTCAAGTTTAAAGGCACTATATTTCAGCAAGGCTAATCTATCATATGAAGATCTTTACACAATTCTTGAAATATTTCCAAAATTGGAATTCTTGAATGTACCGCACAATGCATTTGTATCCCTCCCAGAATGCATCAAAGGATCTTTGCTGCTGAAAAGTCTTGACATAAGCTTTTGCAGGAACCTTGTGGAAATCCCAGAACTTCCATTAACTGTTCAGAATGTAGATGCAAGATACTGTCAGTCCTTAAGTACAACAGCATCAAGTGTGCTATGGTCTCAGGTTTTTAAAGAGACAGAAAGAATACAGGTCGTGATGCCAAAAACAGAAATTCCGAATTGGTTTGACTGTGTTGGAAGTGAAGATATTCTGGTTTTCTGGGCTCGCCACAAGTTCCCTATTATTGCACTAGCATTTGGGCTCCATGAGATACAAATGGACAGCTCAGCATTCTTCCCTGGAATCATATCAGCTAACCAGTCCCACAATGTTGGCCTGTACTTGTTTATAGACGGCCAAGAAATATGTCACAAAGATTACAATGTTGGGAAAAATCATGTGTTAGTGTGTGAGTTAAGGGCTTTGTTCAATGATGAAGAGTGGAAGGGTCTTGATGCGCGCCTTGGAGATGATTGGAAGCCTGTTCAGGTTCAATGTAAATCAAACTTGATATTGAATCGTTGGGGAGTTTATGTCTACAAGAGGAAAACTAATGCTGATGATATCCGGTTTAGTTTTCCCGATTCAATAGACAATGTGCCATCATCATGTTTGGTTCCAAAACCAACTCCAGATCAGAAAATAAAACAAGGTCTTGATTTTGTTGAAATATTTGGCCAGTATTTGAATACTCTTAAATTAGAGCAATCTGCCTATGTTGCAAATGAGCTATTGAGATGGTGGAGGAATTCTAAGGGTGATGTCAAAGAGGAAGTTTCATCCTCTACATATGGAGCTAGTTTAATGCAAGAACACGAACAATGTTTGTGGGATTTGGCACATATTTTAGAGATGATGGAGAATGTAGCAAAACACATCACTGATTCAAAAGTTCAAAGTGCAGGCCAGTTGGTGATACAATTATTGATGGCGCGTGCACAACCTATGAAGGAAAAAGGCCATGAGACGTTGCACATTAATACAAGCATTCCTGTTATACTGGAGGAATGTGAGTACCACCCTTGTACAGATTTAGCAGAAGCTCCGAGACGTCGCTATTGGGGAAGCGTGGAGCTAGAAGAAGGAGATCCATTTGTGTGGAGAATTTGGAAAAGCAAAGAATCCTTTCAGGAGAGGGTAAGCATTGTTTTGTCAAAATATCAGCATACCTCTACAGAGGGAGCTTCAAGCTCTTGCCATGGGGGATCCTTGGAGGAAGAAAACAAATATCCTCCTGCATTGGAAGAATTAACTAGGAGGATAGAGCAAGATGCAATGAGGTTGAACAAATCTTATGGGAAGTTGAAGGCTTATTTTGTTCCAATAGATGTCCCAGTTTCTGACAAATATAATTTGGAAACAGCAATCATCAGAGGACAAGAAAGGTTGGGAAGGTTAGGGTCTAATTTCAACAAGACACCTTATGGGAAGTTGAGGGTGGCGCATGATGATGCTCTGGATACTGTTCATATGCAGCCTGAGTTGAGGGTGGAGCATGATGATGCTTTAGGTACTGTTCATATGCAGCCTGAGTTGAGGGTGGATCATGATGCTCAGAACACTAGTCAGAGTCAGAAGCAATATGAGTTGGGGGTGAAGCATGTTGCTCAGAGTCAGAGCACTGTCCAGAATCAAAGTAAGAAGGGTTGGACTAAGATTCTTAATTGGTGGATCCGCTGA 3783 0.3968 MNMRREKEKTQRRRDESELIEKIVKDTFTKLAPVPFQIPHVVGLDAHFECVMSVLDIESKDTVGMLGIYGSGGIGKTTFAAYLYDNIRHKFEAATFLIHDRERTNRSIVEGLDDLQKTLLSQMGEEAKTLVGSTLDRCNEIKLRLRKSRVLLVLDDVDNKVILKSLAGGCDWFGPGSRIIITTRDAAVLDNHDVEIKKYKLEELNDHDSLELFCSKAFGMSRPAENFENMSSRAVSYAKGIPLALRVIGSNLKDRSIEEWEIELGKYRKVPDAEIQRVLEISYDSLSELDQRIFLDIACFFIREKWIYVQRILEACDFSPSFRVFDSKCLISIDENGCLEMHDLIRDMGREIVRKKSPSNPGERSRLWSCEDILQVLQENSGGSKIEGIMLHPPIHEEIDHWTNTSFEKMSNLRILIVRNATFSTGPSYLPNSLRLLDWMGFPSKSLPTDFHPERIVDFKLSYSSLIFAEPLQAFKDLIFMNISQCQSITHIPNLSGAKSLRALTLDRCYKLEGFDKSFGLYMTNLVYLSASECTMLKSFVPTMYFPSLEVLSFNFCTSLESFPDVKRKMDKLLKIHLKNTSIKEFPNSIPKLTGLEYVDLSNCEGVRDLSRSFLLLPKLVTLKVDGCSQLGQSFKKFKESLSVGNPCSSLKALYFSKANLSYEDLYTILEIFPKLEFLNVPHNAFVSLPECIKGSLLLKSLDISFCRNLVEIPELPLTVQNVDARYCQSLSTTASSVLWSQVFKETERIQVVMPKTEIPNWFDCVGSEDILVFWARHKFPIIALAFGLHEIQMDSSAFFPGIISANQSHNVGLYLFIDGQEICHKDYNVGKNHVLVCELRALFNDEEWKGLDARLGDDWKPVQVQCKSNLILNRWGVYVYKRKTNADDIRFSFPDSIDNVPSSCLVPKPTPDQKIKQGLDFVEIFGQYLNTLKLEQSAYVANELLRWWRNSKGDVKEEVSSSTYGASLMQEHEQCLWDLAHILEMMENVAKHITDSKVQSAGQLVIQLLMARAQPMKEKGHETLHINTSIPVILEECEYHPCTDLAEAPRRRYWGSVELEEGDPFVWRIWKSKESFQERVSIVLSKYQHTSTEGASSSCHGGSLEEENKYPPALEELTRRIEQDAMRLNKSYGKLKAYFVPIDVPVSDKYNLETAIIRGQERLGRLGSNFNKTPYGKLRVAHDDALDTVHMQPELRVEHDDALGTVHMQPELRVDHDAQNTSQSQKQYELGVKHVAQSQSTVQNQSKKGWTKILNWWIR* 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4723 1260 Gene3D - 203 287 IPR042197 -
Lja3g4723 1260 Gene3D - 19 199 IPR027417 -
Lja3g4723 1260 PRINTS Disease resistance protein signature 65 80 - -
Lja3g4723 1260 PRINTS Disease resistance protein signature 591 607 - -
Lja3g4723 1260 PRINTS Disease resistance protein signature 238 252 - -
Lja3g4723 1260 PRINTS Disease resistance protein signature 144 158 - -
Lja3g4723 1260 SUPERFAMILY L domain-like 390 735 - -
Lja3g4723 1260 Pfam NB-ARC domain 49 262 IPR002182 GO:0043531
Lja3g4723 1260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 967 IPR044974 GO:0006952
Lja3g4723 1260 Gene3D Ribonuclease Inhibitor 396 569 IPR032675 -
Lja3g4723 1260 Gene3D Ribonuclease Inhibitor 570 745 IPR032675 -
Lja3g4723 1260 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 967 - -
Lja3g4723 1260 SUPERFAMILY "Winged helix" DNA-binding domain 274 378 IPR036390 -
Lja3g4723 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4723 Lja-Chr3 89343164 89348200 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4723 14 631 WRKY Transcription Factor Family AT4G12020 31.868 2.64e-73 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4723 - - gmx:100801337 1389.79