Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4721 ATGACAAGCACATACACACCCACTAACATTTGCAAAGCAAGACAGAGAGCAACAAATATTAATTTTTTTCCCACCACTCCCACTGTCATGGATGAATTCTTCTATGATGTTTTCCTGAGTTTTAGAGGTGAAGGTGGAACCCGCTACGGGTTCACAGATCATCTCTTCACTGCTTTGAGGCAAAAGGGAATCCACACTTTCAGAGATGATAAGGAGCTGAAAATTGGAGCAGAAATCGGACCTGCTCTTTTGAAAGCAATCAGAAATTCCAGAATGTTAATTGTTGTTCTGTGCCAGAACTATGCATCTTCCACTTGGTGTCTAAACGAACTCGTTGAGATTATTGACTGTTATGACAAGAAAGGAACGCAGGTTTTGATTGTTTTTTATAAGGTGGAACCTTCTGATGTGTGGGAACTCAAGAATAGTTATGCAGATGCCATGGCTGAACATGAAATGAGATTTGGAAAAGACTCGAAGGAGGTCAAAACATGGAGGACAGCTTTGTCCAGAGTACGCGACCTCACAGGAGAACATTGCAGTGATGACACGTATGAACCTGGTCTTATCAAGAAGATTGTTAAAGACGCATCTGCTAAATTACCTCCTATCCCTCTACCAATCAAACACATAGTTGGACTTGATTCCCGCTTTGAGCAGGTGGAACCACTTTTAGATACTAAGTCTATTGGTGCCGTTTGCATGTTGGAAATTTACGGAGCTGGTGGAATAGGCAAAACCACATTTGCCTTGGATATCTATAACAAAATCAGACATCAATTTGAAGCTTCAAGTTTTCTTGCTAATATCAGAGAAAAATCAAGCAAAAGCAAAGGCCTGGAAGATCTTCAAAAGACCCTCATGTCAGAGATGGGTGAGGAGACAGAAACAATGATGGGCAGTACTTTTAGAGGAGATTTTGAGATCAAACGCAGGCTTAGCAACAAAAGAGTTCTTCTAGTTCTGGATGATGTTGACAAAATAAAACAGTTGCAAGCACTGGCTGGGGGAGGTGATTGGTTTGGTTCTGGTAGCAGGATCATCATAACAACAAGGGATACAACAATGCTGGATAAACATAAGATGGATGATGTTATCATGAAAAAATATAAAATGGAGGAGCTAAATGATCATGACTCTCTTGAACTCTTCTGCTGGCATGCCTTTAACATGAGCACACCTGCAGAAAACTTTGAAGGTGTTTCTAGTCATGCTGTAAGTTATGCAAAGGGTGTTCCGTTGGCTTTAAAGGTAATAGGCTCCAATTTAAAAGGTGGGAGATTAGAAGATTGGGAAATAGAATTGAACAAATACAGGACAATTCCAAACTCTGAGATTCAAGGAGTGCTTGAAATAAGCTACTTTAGTTTGTCTGAGTTGGACCAGAAAACTTTCTTGGACATTGCTTGTTTCTTTAAAGGAGAGAGATGGGTATATGTTGAAAGGGTACTAGAGGCTTGTGATTCCTTCCCATGTATTCGAGTATTTGTCATGAAAAGTCTCATTAACATTGATGAAAATGGCTGCTTGGATATGCATGATATAATACAGAACATGGGTAGAGAGATTGTTAGAAAGGAGTCGCCATTAAACCTTGGTGACCGGAGCAGATTATGGTCTCATAAGGAAGTTCTTCAAGTACTTAAAGAAAACTCAGGAAGTGCCACAGTTGAAGGAATAATACTTGATCCCCCTAGTCATGAAGAAGTGTTTCGTTGGGCAGATACTGCCTTCAAGAAGATGGAGAATCTTAGAATTCTTATTGTTCGGAATGCTACATTTTCAACAGCTCCTAGTTTTTTACCAAACAATTTACGGGTACTTGATTGGAAGGGGTACCCATCAAAGTCTTTTCCACTTGACTTTTGTCCCCAAAGAATTGTTGATTTCAAGTTACCTCATAGTTCTCTGACGTTGATAAAGTCATTTCATGAGATGTTTGAGGATTTGACATTCATCAATCTCTCCCAGTGTCAATTCATAACTCAAATACCCAAGCTGTCTGGAGCAAAAAGTTTAAGAGTATTGACAGTTGACAGATGCCATAAATTAATAAGGTTTGATGAATCCATTGGATTCATGCCTAACCTTGAGTATTTAAGTGCTGTAGAGTGTACCAGTCTCAAAAGTTTTGTGCCGAGAATGTATCTGCCAGCTCTCGAGGTGCTTTCATTTAACTTATGCAGAAGACTTGAACACTTCCCAGATGTAATGCAAAAGATGGATAAGCCACTGAAAATTCACATGATAGGTACTGCTATTAAGAAGTTTCCCAAGTCCATTGGTAACCTTACTGGACTTGAGTATATTGACATATCAATGTCTAGAAGACTCAGTGATCTATCAAGTAGCTTCTTATTGCTGCCTAAACTTGGCACTTTGAGAATTGATGGTTGTTCTCAACTTAGAGGATCATTTCAAAGGTTCAAAGAGTTCCATTCAGAAGCAAATGACTGCCCCAATATGGTGACACTATATTTAAGTGATGCTAATCTATCAGATGAAGATCTTCACATAATTCTTGAAAGTTTTCCAAAATTGGAACACTTGAATGTATCACACAATAATTTTGCTTCTCTCCCAAAATGCATCAAAGGATCTCTGCATCTGAAAAGTCTTGATGTGAGTTATTGCAGGAATCTTAAGGAAATTCCAGAACTTCCATTAAGCATTCAGAAAGTAGATGCAAGATACTGCGGATCCTTGACTTCAAAGGCATCAAGCATGCTATGGTCTAAGGTCTGTGAAGAGAAGAAAGAAATACAAGTTGTGATGCCAAAAACAAAGATTCCAAATTGGTTTGACATTAGCTGTGTTAGCAATGAAGATGTTCCACTTTTCTGGGCTCGCCGGAAGTTCCCCGTTGCTGCTTTAGCACTGGTGTTTGGGAATTCCAGAGAGATTAATGTGATTCAGAAGGACACCTTCATCTCAGACTTCCTACCCGGAATGATGACTGATATGTCCCACGTTGTTGGTCTCCACTTGTTCATAGACGGCCAAGAAATATGCCGCAAAGATTACCATTACTGCAGTGTCGGGGAACATCATGTGTTAGTGTGTGATCTAAGGATTTTGTTCAGTGATGAAGAGTGGCAGGGACTTGATGCATGTCTTGGAGATGATTGGAAGGCCATTCAGGTTCAATGTGAATCATCACTGACTCTGAGCAGTTGGGGTGTTTATGTGTACAAACAGAAATCAAACACTGATGACATCCAATTCAAGTTTTCCCATCCCGATTCCTCAGGAGATTACAAGCCAGTGCCAGCATCATCTTTAGTTCCAAAAAGTACTCCACAGATGCTAAAGCAGAGAATAAGATACGCATCAGAAAACATGAACCCAAGAGAAATATTTGGAGACTATTTGCCTTTTCTTGAGATAGAAGAAACACCCAGTTTCACCAAGGCGTTATTGAGGTCGTGGAGGATTGCCAAGACTGACATGAGAGAAGCTTCAGCCTCTGCCTACGGAGCAAGCTTAATGCAAGAACATGAAGAATCTGGCTGGGATGTGGTGCGGGTTGTGGAGTTGATGAAGGAGAATGTGCCGAAACACATCGCTGATTCATACTCGGATGACATACAAAGTGCACATAAAATTGTGGAGCAAGTGTTGAGGGCACGGGTGGAATTTCAGAGGGAAAAGGGCAATGAAAGGTTGGACATCGATATGCCTATAATCCTAGAGGCATGTCATTTTTGTGAAGCTTCAAGCCGTCGCTACTGGGGAAAATTGGAGTTGAAACATGAAGAGCCAACAGTGAAAGCAATACTGAGAAAGACAAGTCAACTTGCGTGGAGATTTTGGAAAATGGGTGAAGCCCCATTAAAAGAGAGGATGAACATTGTTCTATTGGAAAGCCAGAGTGAGAGTCTGTCAACTGAGGAAGCTTCAACCTCTGCGCATGGGGAGGAGGAGGAGGAAGAATATTATGATCCTGTGTTGGAAGAGTTGTTGATGAAGGTAGAGGAGGACACCATGAGCTTGAATAGAACTTACGGGAAGTTGAAGGCTTCTATTGTTCTGTGCACGAATGAAGAACTGGTTTCTGACAAATATTTGTTGGAAACTTTATTCCTCCGTGGACAGCAAAATCTGGCACAAGGAAACACGGGATTGGGAAATTTTGAATTGGGGTTGTTTGGAATGTTCGGGTCGGGTTTGAGAGGGACGATGAGATCTAATTTCAAGAAGACAGCTTATGGGAGGTTGAGGGTGGAGGATGATGGTCCTCATCAAACTGCTCAGAGTCAGAATGTGAATCAAGACCAGGTGCTGCATGAGGTAAGGGATGCTCAGAATCAGAATCAGGGTATTCAGCATGATTTAAGGGATGCTCAGAATCAGAATCAGGGTATTCAGCATGATTTAAGAGGTGCTCAGAGTCAGAGCACTCAGAATCAAAATAAGTTGGGCTGCACCGATGTTCTTATGAGGTGGATTCTATGCTGCTGTACCACCAAATCTCACGAGTCATAA 4485 0.41 MTSTYTPTNICKARQRATNINFFPTTPTVMDEFFYDVFLSFRGEGGTRYGFTDHLFTALRQKGIHTFRDDKELKIGAEIGPALLKAIRNSRMLIVVLCQNYASSTWCLNELVEIIDCYDKKGTQVLIVFYKVEPSDVWELKNSYADAMAEHEMRFGKDSKEVKTWRTALSRVRDLTGEHCSDDTYEPGLIKKIVKDASAKLPPIPLPIKHIVGLDSRFEQVEPLLDTKSIGAVCMLEIYGAGGIGKTTFALDIYNKIRHQFEASSFLANIREKSSKSKGLEDLQKTLMSEMGEETETMMGSTFRGDFEIKRRLSNKRVLLVLDDVDKIKQLQALAGGGDWFGSGSRIIITTRDTTMLDKHKMDDVIMKKYKMEELNDHDSLELFCWHAFNMSTPAENFEGVSSHAVSYAKGVPLALKVIGSNLKGGRLEDWEIELNKYRTIPNSEIQGVLEISYFSLSELDQKTFLDIACFFKGERWVYVERVLEACDSFPCIRVFVMKSLINIDENGCLDMHDIIQNMGREIVRKESPLNLGDRSRLWSHKEVLQVLKENSGSATVEGIILDPPSHEEVFRWADTAFKKMENLRILIVRNATFSTAPSFLPNNLRVLDWKGYPSKSFPLDFCPQRIVDFKLPHSSLTLIKSFHEMFEDLTFINLSQCQFITQIPKLSGAKSLRVLTVDRCHKLIRFDESIGFMPNLEYLSAVECTSLKSFVPRMYLPALEVLSFNLCRRLEHFPDVMQKMDKPLKIHMIGTAIKKFPKSIGNLTGLEYIDISMSRRLSDLSSSFLLLPKLGTLRIDGCSQLRGSFQRFKEFHSEANDCPNMVTLYLSDANLSDEDLHIILESFPKLEHLNVSHNNFASLPKCIKGSLHLKSLDVSYCRNLKEIPELPLSIQKVDARYCGSLTSKASSMLWSKVCEEKKEIQVVMPKTKIPNWFDISCVSNEDVPLFWARRKFPVAALALVFGNSREINVIQKDTFISDFLPGMMTDMSHVVGLHLFIDGQEICRKDYHYCSVGEHHVLVCDLRILFSDEEWQGLDACLGDDWKAIQVQCESSLTLSSWGVYVYKQKSNTDDIQFKFSHPDSSGDYKPVPASSLVPKSTPQMLKQRIRYASENMNPREIFGDYLPFLEIEETPSFTKALLRSWRIAKTDMREASASAYGASLMQEHEESGWDVVRVVELMKENVPKHIADSYSDDIQSAHKIVEQVLRARVEFQREKGNERLDIDMPIILEACHFCEASSRRYWGKLELKHEEPTVKAILRKTSQLAWRFWKMGEAPLKERMNIVLLESQSESLSTEEASTSAHGEEEEEEYYDPVLEELLMKVEEDTMSLNRTYGKLKASIVLCTNEELVSDKYLLETLFLRGQQNLAQGNTGLGNFELGLFGMFGSGLRGTMRSNFKKTAYGRLRVEDDGPHQTAQSQNVNQDQVLHEVRDAQNQNQGIQHDLRDAQNQNQGIQHDLRGAQSQSTQNQNKLGCTDVLMRWILCCCTTKSHES* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4721 1494 SUPERFAMILY "Winged helix" DNA-binding domain 444 549 IPR036390 -
Lja3g4721 1494 Coils Coil 1431 1465 - -
Lja3g4721 1494 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 41 1143 - -
Lja3g4721 1494 SUPERFAMILY L domain-like 566 905 - -
Lja3g4721 1494 MobiDBLite consensus disorder prediction 1290 1310 - -
Lja3g4721 1494 Pfam NB-ARC domain 222 424 IPR002182 GO:0043531
Lja3g4721 1494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 468 IPR027417 -
Lja3g4721 1494 Pfam TIR domain 35 200 IPR000157 GO:0007165
Lja3g4721 1494 Gene3D - 374 458 IPR042197 -
Lja3g4721 1494 SUPERFAMILY Toll/Interleukin receptor TIR domain 27 177 IPR035897 -
Lja3g4721 1494 Gene3D - 201 368 IPR027417 -
Lja3g4721 1494 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 1143 IPR044974 GO:0006952
Lja3g4721 1494 SMART till_3 34 175 IPR000157 GO:0007165
Lja3g4721 1494 Gene3D - 30 200 IPR035897 -
Lja3g4721 1494 PRINTS Disease resistance protein signature 409 423 - -
Lja3g4721 1494 PRINTS Disease resistance protein signature 762 778 - -
Lja3g4721 1494 PRINTS Disease resistance protein signature 235 250 - -
Lja3g4721 1494 PRINTS Disease resistance protein signature 312 326 - -
Lja3g4721 1494 ProSiteProfiles TIR domain profile. 33 201 IPR000157 GO:0007165
Lja3g4721 1494 Gene3D Ribonuclease Inhibitor 748 922 IPR032675 -
Lja3g4721 1494 Gene3D Ribonuclease Inhibitor 571 747 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4721 Lja-Chr3 89327565 89335843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4721 12 811 WRKY Transcription Factor Family AT4G12020 30.182 2.32e-80 291