Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4719 ATGAAACTGGTTGTGGAGGTTATTAATGCTCATGATCTCATGCCAAAAGATGGTGAAGGATCAGCAAGTCCTTTTGTGGAAGTAGACTTTGGAAACCAATTAAGCAGAACCAGAACTGTCAAAAAGAACCTTAACCCCACTTGGACTCACAAACTGCTCTTTCATTTAGATGCAACCAAACCTTTCCATCGCCAAACGATTGAAGTCTCGGTGTACCACGAGCGGAGGCCTCTTCCGGGCAGAACTTTCCTTGGAAGAACAAGAATTCCTTGTTCTAACATTGTCAAGGAAGGTCAACAAGTGTATCAGATTTTCCCACTAGAAAAGAAGTGGGTTTTGTCATCTGTTAAGGGTGAGATTGGCCTAAAAATATACACTGCCTCAGAGGCTAAACCTAAAGCTTTCTCCCCTATTTTCCCTTCAGAATTAGAGAATTTCTCAGCTTCCACTCCATTGCAAGTGCCAGAATCCATTACAACTCCCTCACTCACAGAAGAAACAGACCTAACTGATAGCACATTAGAAGCTGATCTCAAAGGAGAAGATCCTGCACTTGACACCCCCGAATTAACAAAAGAAGAAGTAGATTTTGTGTCTAGTGGCATTGATATTGATCACGAGCCAAAGAAAGAAAGCAAAGAACCTGTCCCAGAAGTAGTTCAACAATTAGACAAACACCAAGTTCTTCAGCAGCCAAGGATTTCAATAAAGAAACGCCCTCAAGGTACTCTATCCACAATGCACTCCTTTGATCATAGATTCCAATCTAGCAATGCTGAAAACTACAATCACAATGACACCAACACACAGCCAAGGATTTCGATAAAGAGAAGACCGCGAGTACCACAAGGTACTCCATTAACAATGAACTCAGTTAATCCACAACTTCATGATCAAAGGTACAATCTCAATAGCACCAACCAACAGCCAAGGATTATATCAGAGACACCAAGACCAGGAAGTCCAATCACAAGGCAGAACCCAGTTAATCTTAATCCCCAAGTCCACACTAACGGCGATGAAAACTACAATCTCAGGGACACCAATCCACAACTTGGTGGAAGAGGGTGGGGGAGTGGTGGTGAAAGATTCACAAGCACATATGACCTTGTTGAGCAGATGTTTTATCTTTACGTTCGCGTGGTTAAAGCAAAGAATCTTCCCCCAGGTACCATCACCTCCAGCTGCAGTCCTTATGTGGAAGTGAAGATGGGGAACTACAAAGGGAGAACAAAGCACATGGAGAAGAAATTGAGCCCAGAGTGGAACCAGGTATTTGCTTTCTCCAAGGACAGCATTCAGTCTTCTTTTCTAGAAGTTTTTGTGAAAGATAAAGAAATGGTGGGTAGAGATGACTATATTGGAAGGGTGATCTTTGACCTCAATGAGGTTCCAACCAGAGTTCCACCAGATAGTCCTCTGGCTCCTCAATGGTACAGGCTTGAGGACTTAAGAGGGGAAGGCAAGGTCAATGGTGACATAATGCTTGCAGTTTGGATGGGAACACAGGCTGATGATGCTTTCTCAGATGCTTGGCATTCAGATGCTGCCACTGTCTATGGGGAGGGTGTTCTCAATATCAGATCAAAGGTTTATGTCTCTCCAAAACTGTGGTATCTCAGGGTCAATGTAATTGAAGCTCAAGATGTGATCCCCGGTGACAGAAACCGCTTACCGGAGGTTTTTGTGAAAGCTCAAGTGGGCTGCCAAGTGCTGAAGACCAAGATATGCCCCACCAGCACTAGAACAACCACTCCACTTTGGAATGAAGATTTGGTTTTTGTGGCTGCTGAGCCATTTGAGGAGAAATTGACAATCACTGTGGAGGATCGCGTGCACCCTTCAAAAGATGAGGTGCTTGGGAAGATAAACCTGCCACTGACCCTCTTTGAGAAGAGGCTAGACCACAGGCCGGTTCATTCCCGCTGGTTCAACCTTGAGAAATTTGGCTTTGGAGGGCTGGAAGGTGATAGGAGGAATGAGCTTAAATTTTCAAGCAGGATTCACCTGAGAGTTTCCCTTGAAGGTGGGTACCATGTCTTAGATGAATCCACTTTGTACATAAGTGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCTATTGGGATACTTGAAGTAGGCATCTTAGGAGCACAAGGGCTTCTCCCAATGAAGATGAAGGATGGCCATGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACCAGAACACTTTTGGACACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGGGTTTTTGACAATTGCCATTTAGGTGGAGATTCAAGGATTGGAAAGGTAAGGATTAGGCTATCAACACTGGAAGCTAATAGGATTTACACCAATTCTTACCCACTTCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACTGCACTCTCATTAGCCAACATGGTTCATATTTATGGCCAACCTTTGCTCCCCAAGATGCACTACTTGCATCCTTTCACAGTTAACCAAATAGACAGCTTAAGGTACCAAGCCATGAACATTGTAGCTGCGAGGCTCGGCCGAGCTGAACCATCTCTGAGGAAGGAAGTGGTGGAGTACATGTTGGATGTTGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTTCGCATCATGTCGCTTTTATCTGGTTTGATCACCATGGGGAGATGGTTCAGTGATGTTTGCAATTGGAAGAACCACATCACATCAATTCTAGTTCACATTCTCTTCCTGATACTGATATTCTACCCTGAATTGATCCTGCCAACTGTGTTTCTCTACATGTTCTTGATTGGTCTTTGGAACTACAGGTTCCGGGCGAAAAACCCATCTCACATGGATACCAAACTCTCATGGGCAGAAGGTGTTCACCCAGATGAGCTTGATGAGGAGTTTGACACATTCCCCACTTCGAGATCACATGACATGGTGAGAATGAGGTATGACAGGCTCAGAACTGTTGCAGGGAGGATTCAGACAATTGTGGGGGACATTGCTACTCAAGGGGAGAGATTTCAGTCTTTATTGAGCTGGAGAGACCCCAGAGCAACCAGCATCTTTGTGTTGTTTTGCTTGTGTGCCGCTGTGGTTCTCTACGCCGCGCCATTCAGAGTGGTGGCAATGGTAACAGGCTTGTACCATTTGAGACATCCAAAGTTTAGGAGCAAGCTACCTTCAGTACCAAGTAATTTCTTCAAGAGGCTCCCAGCTAGAACAGATAGTTTGCTGTGA 3324 0.4465 MKLVVEVINAHDLMPKDGEGSASPFVEVDFGNQLSRTRTVKKNLNPTWTHKLLFHLDATKPFHRQTIEVSVYHERRPLPGRTFLGRTRIPCSNIVKEGQQVYQIFPLEKKWVLSSVKGEIGLKIYTASEAKPKAFSPIFPSELENFSASTPLQVPESITTPSLTEETDLTDSTLEADLKGEDPALDTPELTKEEVDFVSSGIDIDHEPKKESKEPVPEVVQQLDKHQVLQQPRISIKKRPQGTLSTMHSFDHRFQSSNAENYNHNDTNTQPRISIKRRPRVPQGTPLTMNSVNPQLHDQRYNLNSTNQQPRIISETPRPGSPITRQNPVNLNPQVHTNGDENYNLRDTNPQLGGRGWGSGGERFTSTYDLVEQMFYLYVRVVKAKNLPPGTITSSCSPYVEVKMGNYKGRTKHMEKKLSPEWNQVFAFSKDSIQSSFLEVFVKDKEMVGRDDYIGRVIFDLNEVPTRVPPDSPLAPQWYRLEDLRGEGKVNGDIMLAVWMGTQADDAFSDAWHSDAATVYGEGVLNIRSKVYVSPKLWYLRVNVIEAQDVIPGDRNRLPEVFVKAQVGCQVLKTKICPTSTRTTTPLWNEDLVFVAAEPFEEKLTITVEDRVHPSKDEVLGKINLPLTLFEKRLDHRPVHSRWFNLEKFGFGGLEGDRRNELKFSSRIHLRVSLEGGYHVLDESTLYISDQRPTARQLWKQPIGILEVGILGAQGLLPMKMKDGHGSTDAYCVAKYGQKWVRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGDSRIGKVRIRLSTLEANRIYTNSYPLLVLHPHGVKKMGELQLAVRFTALSLANMVHIYGQPLLPKMHYLHPFTVNQIDSLRYQAMNIVAARLGRAEPSLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGLITMGRWFSDVCNWKNHITSILVHILFLILIFYPELILPTVFLYMFLIGLWNYRFRAKNPSHMDTKLSWAEGVHPDELDEEFDTFPTSRSHDMVRMRYDRLRTVAGRIQTIVGDIATQGERFQSLLSWRDPRATSIFVLFCLCAAVVLYAAPFRVVAMVTGLYHLRHPKFRSKLPSVPSNFFKRLPARTDSLL* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4719 1107 Pfam Plant phosphoribosyltransferase C-terminal 952 1107 IPR013583 -
Lja3g4719 1107 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Lja3g4719 1107 ProSiteProfiles C2 domain profile. 521 644 IPR000008 -
Lja3g4719 1107 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Lja3g4719 1107 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 3 142 - -
Lja3g4719 1107 Gene3D C2 domain 372 517 IPR035892 -
Lja3g4719 1107 ProSiteProfiles C2 domain profile. 358 479 IPR000008 -
Lja3g4719 1107 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 704 829 IPR035892 -
Lja3g4719 1107 Gene3D C2 domain 680 828 IPR035892 -
Lja3g4719 1107 Gene3D C2 domain 526 674 IPR035892 -
Lja3g4719 1107 CDD C2C_MCTP_PRT_plant 539 693 - -
Lja3g4719 1107 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 142 - -
Lja3g4719 1107 CDD C2B_MCTP_PRT_plant 376 502 - -
Lja3g4719 1107 MobiDBLite consensus disorder prediction 310 333 - -
Lja3g4719 1107 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 333 1107 - -
Lja3g4719 1107 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 333 1107 - -
Lja3g4719 1107 ProSiteProfiles C2 domain profile. 682 805 IPR000008 -
Lja3g4719 1107 MobiDBLite consensus disorder prediction 339 358 - -
Lja3g4719 1107 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 376 515 IPR035892 -
Lja3g4719 1107 SMART C2_3c 705 804 IPR000008 -
Lja3g4719 1107 SMART C2_3c 376 473 IPR000008 -
Lja3g4719 1107 SMART C2_3c 539 641 IPR000008 -
Lja3g4719 1107 SMART C2_3c 2 103 IPR000008 -
Lja3g4719 1107 Pfam C2 domain 538 646 IPR000008 -
Lja3g4719 1107 Pfam C2 domain 376 479 IPR000008 -
Lja3g4719 1107 Pfam C2 domain 2 106 IPR000008 -
Lja3g4719 1107 Pfam C2 domain 704 807 IPR000008 -
Lja3g4719 1107 CDD C2D_MCTP_PRT_plant 705 824 - -
Lja3g4719 1107 Gene3D C2 domain 1 126 IPR035892 -
Lja3g4719 1107 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 538 695 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4719 Lja-Chr3 89307135 89310491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4719 2 1107 Lipid Metabolism Gene Families AT5G48060 64.470 0.0 1418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4719 - - gmx:100816204 1809.27