Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4699 ATGGCTCACAAAATTAAAAAAGAAGAAACCGAATTCAAGGTTCCTGAAACCAAAACAACACCGTGCACCGCCACCACCGCAGCTACCTCGATCTCAGAACCGTCTAGATTCTTTGACGATAAGGCCACCGCTAACGCAACCGTCACCGCAACGCCAGCACGATCTCCTAAGAGATCTCACCCTCCAGATGATGAGGAAGCACAAGGAACAACCCAAACGACGCCGTCGGAGGCCAAACGCGCGGTCAACCGCTGCTCCGGGTGTCGTCGGAGGGTCGGTTTAACCGGATTCCGCTGCCGATGCGGGGAGCTTTTCTGCGCCAACCACCGCTACTCCGACCGTCATGACTGCTCCTACGACTACAAAGCCGCTGGACGAGAAGCCATCGCGAGGGAGAATCCTGTCGTCAGAGCAGCGAAGATCATCAAGCTCTGA 435 0.5563 MAHKIKKEETEFKVPETKTTPCTATTAATSISEPSRFFDDKATANATVTATPARSPKRSHPPDDEEAQGTTQTTPSEAKRAVNRCSGCRRRVGLTGFRCRCGELFCANHRYSDRHDCSYDYKAAGREAIARENPVVRAAKIIKL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4699 144 Gene3D - 53 140 IPR035896 -
Lja3g4699 144 MobiDBLite consensus disorder prediction 1 15 - -
Lja3g4699 144 ProSiteProfiles Zinc finger AN1-type profile. 79 125 IPR000058 GO:0008270
Lja3g4699 144 MobiDBLite consensus disorder prediction 16 33 - -
Lja3g4699 144 PANTHER AN1-LIKE ZINC FINGER PROTEIN 1 143 - -
Lja3g4699 144 MobiDBLite consensus disorder prediction 1 80 - -
Lja3g4699 144 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 143 - -
Lja3g4699 144 SUPERFAMILY AN1-like Zinc finger 69 138 IPR035896 -
Lja3g4699 144 Pfam AN1-like Zinc finger 85 122 IPR000058 GO:0008270
Lja3g4699 144 MobiDBLite consensus disorder prediction 66 80 - -
Lja3g4699 144 SMART AN1_Zf_4 85 122 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4699 Lja-Chr3 89043238 89044766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4699 73 144 C2H2 Transcription Factor Family AT3G52800 58.333 1.84e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4699 - - lja:Lj3g3v0478150.1 270.011