Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4688 ATGGTTGATCAGGTTCAGCGCGCTAGAATCAATGAGAATGTTGCAGCCCAGCCCTATCTCCGATATGGTCTCTCTTCATACCAAAGGCGGTTTGGGAATTACTCGAATGCCGCATTTCAGTATCCGGTGATGCCATCATGCAGAGCCACAACTGATTTTTCTACCGTTGCAGCAACTACCTCCCCTGTCTTTGCTGCAGCTCCTGCAGAGAAAAGCCACTTTCTTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTATCCAAAACCGCAGCTGCTCCCATTGAAAGGGTTAAACTTTTGATCCAGAACCAGGACGAGATGATCAAAGCTGGAAGACTTTCTGAGCCCTATAAGGGTATTGGTGATTGTTTTACGCGAACAATGAAGGATGAGGGTGTGGTTGCTCTCTGGAGAGGCAACACTGCAAATGTCATCCGTTATTTCCCCACTCAGGCCTTGAACTTTGCATTTAAGGACTACTTCAAGAGGCTTTTCAATTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGGCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTATTTGTCTACTCCCTCGACTATGCCCGTACCCGTCTGGCTAATGATGCAAAGGCTGCAAAGAAGGGCGGAGGAGGACGACAATTCAATGGTCTCATTGATGTCTACAAGAAGACATTGGCATCTGATGGTGTTGCTGGTCTTTACCGTGGTTTCAACATTTCCTGTGTTGGAATCATCGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTCCTGACCGGATCTTTGCAGGATAGTTTCTTTGCTAGCTTTGGTCTTGGATGGCTCATCACCAATGGTGCAGGTCTAGCATCTTACCCAATTGACACTGTCCGAAGAAGAATGATGATGACCTCAGGGGAAGCTGTGAAGTACAAGAGCTCAATGGATGCATTTACCCAAATCCTCAAGAACGAGGGTCCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTTCGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGCTATGACAAGTTGCAGGTGGTGTTCTTCGGCAAGAAGTATGGATCCGGTGGTGCTTAA 1128 0.4752 MVDQVQRARINENVAAQPYLRYGLSSYQRRFGNYSNAAFQYPVMPSCRATTDFSTVAATTSPVFAAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFTRTMKDEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLIDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFTQILKNEGPKSLFKGAGANILRAVAGAGVLAGYDKLQVVFFGKKYGSGGA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4688 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 364 IPR018108 -
Lja3g4688 375 Pfam Mitochondrial carrier protein 72 169 IPR018108 -
Lja3g4688 375 Pfam Mitochondrial carrier protein 176 273 IPR018108 -
Lja3g4688 375 Pfam Mitochondrial carrier protein 279 367 IPR018108 -
Lja3g4688 375 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 23 375 - -
Lja3g4688 375 PRINTS Adenine nucleotide translocator signature 177 190 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 PRINTS Adenine nucleotide translocator signature 118 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 PRINTS Adenine nucleotide translocator signature 151 163 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 PRINTS Adenine nucleotide translocator signature 74 86 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 PRINTS Adenine nucleotide translocator signature 283 299 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 77 90 IPR002067 GO:0055085
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 90 104 IPR002067 GO:0055085
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 140 160 IPR002067 GO:0055085
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 243 261 IPR002067 GO:0055085
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 287 309 IPR002067 GO:0055085
Lja3g4688 375 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Lja3g4688 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 165 IPR018108 -
Lja3g4688 375 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 23 375 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lja3g4688 375 Gene3D Mitochondrial carrier domain 75 371 IPR023395 -
Lja3g4688 375 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 270 IPR018108 -
Lja3g4688 375 SUPERFAMILY Mitochondrial carrier 72 360 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4688 Lja-Chr3 88906829 88909873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4688 1 375 Antiporters AT5G13490 77.354 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4688 K05863 - gmx:100819556 625.935