Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4672 ATGGGGAAGATAGAAAAAAAACACACCAATTCTGCACCACAACATCATCATTTTCTATCATCCTTATCATCTCTCATGATGATGCCTATCCTCCTGGTCTTTCTTCTCTTGGCCTTAACCTCCCCTGCTTCTGCTTCCTCTGCTTCCATTCCCAAAGATAACTTCCTCATTGATTGTGGTGCAGAAAAAGCACCAACCCTCCCTGATGGAAGACAATTCAAAACAGACCCACAAGCCAATTCCTTCTTGCAAGCTAATGATGATTTTAAGGTCTCAGCAGAAGGTGTGGATGTTCCTTCACCTATATATTCCAATGCAAGGATCTTCATTCAGGAAGCAAAGTACTCCTTCCATTTGGTTCAGCCAGGTTTTCATTGGGTTAGGCTTCATTTTTACCCTATTAAAAACAATGTATTTGATCTCCAAAAGGCAACTTTCTCTGTGAACACAGATGCATTTGTCCTCCTCCACAGCTTCAATGTGAACAACAATGAAAAGACAATATTGAAAGAGTATCTCATCAATGCAACAGAACCCCAATTCACATTATCCTTCATTCCTTTGAAAAACTCAGCTGCATTCATCAATGCCATTGAAGTTGTTTCAGCTCCTGATAACCTCATCTTCGACACCGGCGCCGCCCTTTTCCCTGTTGGGGAATTTTCAGGCCTCACAGGCTATGCTTTTCAACCAGTTTTCAGGCTCAACAATGGAGGACCTCTGATCACCCCATCAAATGACACCCTTGGAAGAACATGGGAATCTGATGAGCCTTTCCTCACAAACAAGAATTTGGCTAAAAAAGCCTCAGTGGCTACCAGTGCCATTAAATTCCCAAAAGACACACCAACAATTTCTCCTCTGATTGCACCACAAACAGTGTATGCCTCAGTCACAGAAATGGGTGATGCTGGTGTGAACCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGACACTTCTTTCAGCTACCTTGTTAGGCTCCATTTCTGTGATATTGTGAGCAAAGGGCTTAATGAGCTCTACTTCAATGTCTATGTGAATGGGAAAATGGCAATTAATAGCTTGGATTTGTCTGCTATAAATGGTGAATTGTCAACACCATATTACAAAGACATCGTGGTGAATGCAACATTGATGTCTGAGGGGCTAACAGTTCAGGTTGGTCCTGCAAATGCTGATGGCGGAAATGCCAATGCTATTCTGAATGGTGTTGAGGTTTTGAAGATAAGCAACTCTGTGAACAGTTTGGATGGAGAATTTGGTGTTGATGGAAGAAAAGCCAGTGGCTCTAACCGCGGGACGGTTGCAGCGGTTGGATTCGCCATGATGTTTGGAGCCTTTGTTGGTCTTGGAGCCATGGTGATCAAGTGGCACAAGAGGCCACAAGATTGGCAAAAGAGAAACAGCTTCTCTTCATGGTTGCTTCCTCTACATGCTGGTGACACAAGCTTCATGAGCAGCAAGACCTCAATGGGGAAAAGCAACATCTACTCCTCATCAATGGGGTTAGGAAGGCTTTTCTCCTTTGCAGAAATCACAGAAGCAACAAAGAATTTTGACTCCAAGAACATCATCGGTGTTGGTGGGTTTGGTAATGTGTATTTGGGTGTGATTGATGAGGGGACTCAAGTGGCAGTGAAAAGAGGAAATCCACAATCAGAACAAGGAATCAATGAGTTCCAAACTGAGATTCAAATGTTGTCTAAACTCAGACACAGGCACTTGGTGTCTTTAATTGGATATTGTGATGAGAATGATGAGATGATTTTGGTTTATGAGTACATGCCTAATGGTCACTTTAGAGACCATCTTTATGGAAAGAACATGCCTGCCATGTCCTGGAAGCAAAGATTAGATATCTGCATTGGCGCGGCGCGTGGTCTTCATTACCTTCACACTGGAACTGCACAAGGAATCATCCACCGCGACGTGAAGACCACAAACATTCTCCTTGATGAGAATTTCACAGCCAAAGTTTCTGACTTTGGGCTTTCAAAGGATGCACCAATGGGGCAGGGTCATGTGAGCACTGCAGTGAAAGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAATTGACTGAGAAATCAGATGTGTACTCATTTGGAGTGGTGCTGTTAGAAGCTTTATGTGCAAGGCCAGCAATTAACCCTCAGCTTCCAAGAGAGCAAGTGAACTTGGCTGATTGGGCTATGCAGTGGAAGAGAAAAGGGCTTCTTGACAAAATCATTGACCCTCTTCTTGTTGGTTCCATTAACCCTGAATCCATGAAGAAGTTTGCTGAGGCTGCTGAGAAGTGTTTGGCTGATCATGGTGTTGATAGGCCTCCAATGGGGGATGTTCTGTGGAACTTGGAGTATGCATTGCAGCTTCAAGAGGCTTTCACACAAGGTAAAGCTGAAGATGAGATCAAATCCTCTGCAGCTTTTCCTACTTCACCTGTTCCTACTCCTACCACACCTTCTGATGAACATCCACTTCCACCTGCTTCACCTTCTCCTGCTCCTGCTCCTGCTGTTGTTCCTGAAGTGAATAATAACAATGCTGCTCCAGCTCAAGTTCATGCTATTGATGACCATTCTGGAACTGCAATGTTTGCACAGTTCAACAACCTTAATGGAAGGTAA 2643 0.4374 MGKIEKKHTNSAPQHHHFLSSLSSLMMMPILLVFLLLALTSPASASSASIPKDNFLIDCGAEKAPTLPDGRQFKTDPQANSFLQANDDFKVSAEGVDVPSPIYSNARIFIQEAKYSFHLVQPGFHWVRLHFYPIKNNVFDLQKATFSVNTDAFVLLHSFNVNNNEKTILKEYLINATEPQFTLSFIPLKNSAAFINAIEVVSAPDNLIFDTGAALFPVGEFSGLTGYAFQPVFRLNNGGPLITPSNDTLGRTWESDEPFLTNKNLAKKASVATSAIKFPKDTPTISPLIAPQTVYASVTEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAINSLDLSAINGELSTPYYKDIVVNATLMSEGLTVQVGPANADGGNANAILNGVEVLKISNSVNSLDGEFGVDGRKASGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKTSMGKSNIYSSSMGLGRLFSFAEITEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPNGHFRDHLYGKNMPAMSWKQRLDICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGSINPESMKKFAEAAEKCLADHGVDRPPMGDVLWNLEYALQLQEAFTQGKAEDEIKSSAAFPTSPVPTPTTPSDEHPLPPASPSPAPAPAVVPEVNNNNAAPAQVHAIDDHSGTAMFAQFNNLNGR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4672 880 MobiDBLite consensus disorder prediction 819 844 - -
Lja3g4672 880 Pfam Protein tyrosine and serine/threonine kinase 524 717 IPR001245 GO:0004672|GO:0006468
Lja3g4672 880 MobiDBLite consensus disorder prediction 813 848 - -
Lja3g4672 880 PANTHER OS07G0166700 PROTEIN 45 827 IPR045272 GO:0004714|GO:0006468
Lja3g4672 880 CDD STKc_IRAK 527 791 - -
Lja3g4672 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lja3g4672 880 ProSiteProfiles Protein kinase domain profile. 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4672 880 SMART serkin_6 521 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4672 880 Gene3D Phosphorylase Kinase; domain 1 484 596 - -
Lja3g4672 880 SUPERFAMILY Protein kinase-like (PK-like) 504 788 IPR011009 -
Lja3g4672 880 Pfam Malectin-like domain 57 410 IPR024788 -
Lja3g4672 880 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Lja3g4672 880 Gene3D Transferase(Phosphotransferase) domain 1 597 815 - -
Lja3g4672 880 PANTHER BNAC03G60370D PROTEIN 45 827 - -
Lja3g4672 880 Gene3D - 229 413 - -
Lja3g4672 880 Gene3D - 54 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4672 Lja-Chr3 88741984 88744626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4672 51 880 Receptor kinase-like Gene Family AT4G39110 68.128 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja3g4672 Malectin_like 4.5e-34 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4672 - - gmx:100790759 1471.45