Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4649 ATGGTAAGGTTCAGTTCAAGTTGTGGCGATTCATACTCCATTTGCCGGCGGTTTCTGCTTCCAATTCTTTTATCACTTCACATTTCCTGTCAGCTTGCAAGCTGTGGCTCCATAGTGCGGTTCCTTCCTGGCTTCGAGGGACCCCTTCCTTTTTTGCTTGAAACCGGGTATGTGGGTGTGGGAGAAACAGAGGATGTGCAGGCATTCTACTACTTCATTGAGTCAGAGAGTAATCCAAGGGTGGATCCTCTCATGCTTTGGCTAACGGGTGGTCCTGGTTGCTCAGTGTTGAGTGGCCTTATGTTTGAAATAGGTCCACTTGCATTTAAAATAGAGGAATACAATGGGAGCGTGCCTAATTTGGTCTTGAGGTCACACTCGTGGACAAAGGTGAGTAGCATTATATTTGTCGATATGCCTGTTCTCACAGGCTTCTCTTATGCAAGAACAAACTCTAGTGCCCAACGAAGCGACTTGTTACTAATTCATCAAGCCCATCAATTTCTCAGGAAGTGGTTGATTCATCATCCAAAGTTTCTTTCAAATGAAGTTTACATTGGTGGAGATTCATCCTCTGGCATTACTATTCCGGCAATTGTTCAAGAAATTTCACAAGGAAATGAAAAAGGACTCAAACCGTGGATAAATGTCCAGGGATACCTACTGGGGAATCCATCTACTTCTATAAGGGAACCAAATTATCAAATTTCCTTTGCTCATGGAATGGGACTTATTTCAGATGAGCTATATGAGTCTCTTCAAAGAAATTGTAAAGGAGAGTATATAGATATAGACCCCACAAATATCTTATGCTCGAGAGATATCAAGTCGTTCAATGAGACTATGTCAGGAATTAACAGTCAACATATTTTAGAACCGGATTGTCATGAATTCTATTTCATTTCAAAGCGAAGATCATTAGTTCAGAAATATCCCTGGAAGATTCTCAGCTCTTATCACAAATTGCCACCCTTATGGTGTCGGATATATGTGTATTTCCTTTGCGAATTTTGGGCCAATGATGATAATGTTCGCAAGGCACTTCACATACGTAAGGGAAGTATAGGGAAATGGCAACGTTGTAGCTATGACATACCTTTCGAGGCGTATATTACTAGCAGCTTTGAGTTCCATGTAAATCTCAGTAGAAAAGGCTATCGTTCACTGATATACAGTGGCGACCATGACATGACGGTGCCTTTCTTGTCGACTCAAGCATGGATAAGATCTTTGAACTACTCCATTGTGGATGATTGGAGGCAATGGTATACAAATGGCCAAGTTGCCGGATATACAAGGACATACTCCAACCGGATGACATTTGCAACTGTAAAGGGTGGAGGACACACAGCACCAGAGTACAAGCCTGAAGAATGTTTAGAAATGTATAGTAGGTGGTTGTCTAACAAGGCTTTGTAA 1419 0.4172 MVRFSSSCGDSYSICRRFLLPILLSLHISCQLASCGSIVRFLPGFEGPLPFLLETGYVGVGETEDVQAFYYFIESESNPRVDPLMLWLTGGPGCSVLSGLMFEIGPLAFKIEEYNGSVPNLVLRSHSWTKVSSIIFVDMPVLTGFSYARTNSSAQRSDLLLIHQAHQFLRKWLIHHPKFLSNEVYIGGDSSSGITIPAIVQEISQGNEKGLKPWINVQGYLLGNPSTSIREPNYQISFAHGMGLISDELYESLQRNCKGEYIDIDPTNILCSRDIKSFNETMSGINSQHILEPDCHEFYFISKRRSLVQKYPWKILSSYHKLPPLWCRIYVYFLCEFWANDDNVRKALHIRKGSIGKWQRCSYDIPFEAYITSSFEFHVNLSRKGYRSLIYSGDHDMTVPFLSTQAWIRSLNYSIVDDWRQWYTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEECLEMYSRWLSNKAL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4649 472 Pfam Serine carboxypeptidase 43 469 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 471 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 Gene3D alpha/beta hydrolase 36 304 IPR029058 -
Lja3g4649 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 147 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 136 IPR001563 GO:0004185|GO:0006508
Lja3g4649 472 SUPERFAMILY alpha/beta-Hydrolases 39 470 IPR029058 -
Lja3g4649 472 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 18 471 - -
Lja3g4649 472 Gene3D - 332 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4649 Lja-Chr3 88554803 88560375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4649 33 62 Calmodulin-binding Proteins AT2G22960 73.333 7.48e-09 53.5