Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4627 ATGGGAACTTCTCTCTTGAACTTCCCATTTTCTGTACAAGGAACTATATTTTCTCAAAGGAAACAACTAACGCATCGATACACAAATCAGAAATCAGAGGAGTATCCAGTTCAAGATAGCTGTATACTACATTCTGCGAGAGCATTGAGGAGGAAACTTTTGCTTTCTGTTTTGGTTTCAACTGGTGTTTTTCCAACTTTATCTTCATATGGGAAGACAAAGGGTATTAATCCGTTTAATGAAAAACGGTTGCTACAACAAAATAAGCAGATACAGAAAGCAAACTATGCGCCAGAAGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTAATATCATCAGAGAACTATATTAAGTGTGATTCAGGACTCATTTACCGAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACATTTCACTATACTGGTTATAACGAATCGGGCCGTCGTATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAAAATTCGCATGGGTACTAAGGCACTAGTTCCAGGGTTTGAGGAAGGAATTAAAGACATGAGACCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCACCGGTAGGACCATCAACCTTTTTCAGCGCAAAACAATTCGAAGTTTTTGACGTTGAACTGTTAGGTATACAGAACTGTGAAAGAAGGACTGTATTAGCCTTTTACTCTGATGTTGTATGCAATTGA 741 0.39 MGTSLLNFPFSVQGTIFSQRKQLTHRYTNQKSEEYPVQDSCILHSARALRRKLLLSVLVSTGVFPTLSSYGKTKGINPFNEKRLLQQNKQIQKANYAPEDFPNFIREGFEVKVISSENYIKCDSGLIYRDFEVGKGDCPKDGQQVTFHYTGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIKDMRPGGKRRIIIPPELGPPVGPSTFFSAKQFEVFDVELLGIQNCERRTVLAFYSDVVCN* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4627 246 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 139 225 IPR001179 GO:0003755
Lja3g4627 246 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 12 246 IPR044239 -
Lja3g4627 246 Gene3D - 103 236 IPR046357 GO:0003755
Lja3g4627 246 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 142 229 IPR001179 GO:0003755
Lja3g4627 246 SUPERFAMILY FKBP-like 79 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4627 Lja-Chr3 88320231 88326401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4627 132 231 Calmodulin-binding Proteins AT5G48570 32.710 6.87e-11 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4627 3 88320231 88326401 Lja3g4627 3 88320231 88326401 ECH