Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4614 ATGGCCCAACACAGTTTTCTTCTCATCTACTTACTATGCTTTGTTCTTGCACCCACAATTCCATTTTTATGTGATGCTGGCAATGACAATGGAGATCATAAACTTTACATCGTATACATGGGTTCACTTCCTGATGAGAGAGATTCTTCTAATTATAATTCCCCAACCTCTCACCACCTCAGCATGTTGCAACAGGTTGTGGGTGGAAGCGACGTGACAAAGCACCATGTTATAAGCTACAATAGGAGCTTCAATGGTTTTGCAGCGAAACTCAGTGAAAAACAAAAGGAAAATATCGCTGCCATGGATGGTGTTGTTTCGGTTTTTCCGAGCAAAACTCTTCAGATTCAAACTACAAGATCATGGGACTTTTTGGGGCTTCGGGAATCGGTTAAAAGACAAACCAAAGAAGAGAGTGATTTGGTGATTGGAGTTATCGACACCGGAATCTGGCCAGAATTAGATAGTTTCTCTGACCAAGGTGTTGGTCCTATTCCAGCGAAGTGGAAGGGTCATTGCAAAGGTGGTGCAAACTTCACTTGCAACAATAAGATCATTGGGGCACGAGCCTATAGCTCTCCCCCAAACGTTACCGCAACTAATGATAACACTGTAAGAGACATCGAAGGGCACGGATCTCACACTGCATCAACGGCAGCTGGAAACACAGTCATTGGTGCAAGCTTTTACGGACTCGCACAAGGCACCGCAAGAGGTGCAGTTCCATCTGCAAGGATAGCTGCATACAAAGTATGCTACCCAAACCACGGCTGCGACGACGCTAATATTTTAGCAGCTTTCGATGATGCCATCGCTGATGGCGTCAACATCTTGAGTGTCTCACTCGGGACTAACTATTGTGTTGACTTATTAAGCGACACCGTCGCAATCGGTTCCTTCCATGCCATGGAGAGAGGGATTCTCACATTGCAGGCTGCAGGAAACTCTGGTCCTGCTTCACCCTCTATTTGTAGTGTGGCGCCGTGGTTGTTGACCGTCGCCGCCAGCACCATTGATCGCCAATTCATTGACAAGGTCCTTCTCGGGAATGGGATGACATTGATTGGAAGGTCCGTGAATGCCGTCGTTTCAAATGGGACAAAGTTTCCTATTGCTAAGTGGAATGCAAGTGATGAAAGGTGCAAGGGATTTTCTGACTTGTGTCAATGTCTAGGAAGCGAGAGCGTGAAGGGAAAGGTGGTTTTATGCGAAGGTAGGATGCATGATGAAGCGGCTTATTTAGACGGTGCAGTTGGTTCAATCACTGAGGATTTAACAAACCCGGACAATGACGTGTCTTTTGTCACTTATTTTCCTTCAGTGAACCTAAATCCAAAAGACTACGCTATTGTCCAAAACTACACAAATTCAGCAAAAAATCCTAAAGCTGAGATATTGAAGAGTGAGATTTTCAAAGATCGCAGCGCTCCAAAGGTTGTTAGCTTCTCATCCCGTGGGCCAAATCCCTTGATTCCGGAGATCATGAAACCGGATGTGAGTGCCCCCGGGGTGGATATCTTGGCTGCGTGGTCACCTGAAGCGGCACCCTCAGAATATTCAAGTGATAAGAGAAAGGTAAGGTACAATGTGGTGTCTGGAACATCAATGGCATGTCCTCATGTTGCTGGAGTAGCCGCGTATGTGAAATCATTTCACCCGGATTGGTCACCGGCGACTATTAAATCCGCAATCATGACTACATCAGATCCCTTGAATGGGAATTATAATATGATTGGTGAGTTCTCTTATGGAGCTGGGAATGTCAATCCTGTAAAAGCTATTGACCCTGGGCTTGTATATGACATTTCTAAGAAAGACTATGTCAAAATGCTTTGCAACTATGGTTATAGTGCTAAGAAAGTTAAGATTGTTGCTGGAGATCATTCAGCTAGTTGTCATGGAGTGGCACACAATAGAAGCTTGGTGAAAGATTTAAACTACCCTGCAATAACAGTAAATGTTGAGCCTTTAAAGCCTTACATTATCAAGGTTAAGAGAATAGTGATGAATGTTGGCTTTCCTCCCAACTCGACCTACAAGGCTACTATCTCGCCGAATCCGAAAATGAACATCACAGTGGAGCCTGAAGTTCTGAGGTTCAAATCGTTGCATGAGAAACATTCTTTTGTTGTCACTGTTGCTGGAGGAGGATTGCAAAGAGATAGTGCAATTTCCTCATCACTTGTGTGGTCAGATGGCAAACATAATGTGAAGAGTCCAATTATTGTGCTTGTCTCCTAG 2241 0.4449 MAQHSFLLIYLLCFVLAPTIPFLCDAGNDNGDHKLYIVYMGSLPDERDSSNYNSPTSHHLSMLQQVVGGSDVTKHHVISYNRSFNGFAAKLSEKQKENIAAMDGVVSVFPSKTLQIQTTRSWDFLGLRESVKRQTKEESDLVIGVIDTGIWPELDSFSDQGVGPIPAKWKGHCKGGANFTCNNKIIGARAYSSPPNVTATNDNTVRDIEGHGSHTASTAAGNTVIGASFYGLAQGTARGAVPSARIAAYKVCYPNHGCDDANILAAFDDAIADGVNILSVSLGTNYCVDLLSDTVAIGSFHAMERGILTLQAAGNSGPASPSICSVAPWLLTVAASTIDRQFIDKVLLGNGMTLIGRSVNAVVSNGTKFPIAKWNASDERCKGFSDLCQCLGSESVKGKVVLCEGRMHDEAAYLDGAVGSITEDLTNPDNDVSFVTYFPSVNLNPKDYAIVQNYTNSAKNPKAEILKSEIFKDRSAPKVVSFSSRGPNPLIPEIMKPDVSAPGVDILAAWSPEAAPSEYSSDKRKVRYNVVSGTSMACPHVAGVAAYVKSFHPDWSPATIKSAIMTTSDPLNGNYNMIGEFSYGAGNVNPVKAIDPGLVYDISKKDYVKMLCNYGYSAKKVKIVAGDHSASCHGVAHNRSLVKDLNYPAITVNVEPLKPYIIKVKRIVMNVGFPPNSTYKATISPNPKMNITVEPEVLRFKSLHEKHSFVVTVAGGGLQRDSAISSSLVWSDGKHNVKSPIIVLVS* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4614 746 SUPERFAMILY Subtilisin-like 116 598 IPR036852 GO:0004252|GO:0006508
Lja3g4614 746 CDD PA_subtilisin_like 346 465 - -
Lja3g4614 746 CDD Peptidases_S8_3 114 569 IPR034197 -
Lja3g4614 746 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 35 744 - -
Lja3g4614 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Lja3g4614 746 Gene3D - 339 472 - -
Lja3g4614 746 Gene3D Peptidase S8/S53 domain 140 607 IPR036852 GO:0004252|GO:0006508
Lja3g4614 746 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Lja3g4614 746 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Lja3g4614 746 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lja3g4614 746 Pfam Fibronectin type-III domain 644 743 IPR041469 -
Lja3g4614 746 Pfam Peptidase inhibitor I9 36 116 IPR010259 -
Lja3g4614 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Lja3g4614 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 744 IPR045051 -
Lja3g4614 746 Gene3D - 611 745 - -
Lja3g4614 746 Pfam Subtilase family 139 571 IPR000209 GO:0006508|GO:0008236
Lja3g4614 746 ProSiteProfiles Serine proteases, subtilase domain profile. 121 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4614 Lja-Chr3 88111499 88114587 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4614 40 742 Subtilisin-like Serine Gene Family AT5G59190 54.866 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4614 - - lja:Lj3g3v0549610.1 1089.33