Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4612 ATGGTCAAACACAGTTTTCTCCTCGTTTTCTTATTAGCCTCCGTTCTTGCACCCACAATTCCATTTTTTTGTCATGCTAGTAATGACGATGGAGATCATAAACTTTACATTGTATACATGGGTTCACTTCCTGTTCAGAGAGGTTCTTCCAATTATTATTCCCCAACCTCTCACCACGTCAGCATGTTGCAACAGGTTGTTGGTGAAAGCGATGTAACAAAGCACCATGTTAGAAGCTACAAGAGAAGCTTCAATGGTTTTGCAGCGAAGCTCAGTGAAAAACAGAGAGAAATGATCGCTGCCATGGATGGTGTCGTTTCGGTTTTTCCAAGTAAAACTCTTCAAATTCAAACGACGAGGTCATGGGACTTTGTGGGACTCCATGAATCAGTTAAACGACAAAAGAAAGAAGAGAGTGATTTGGTAATCGGACTCATTGACACGGGAATCTGGCCAGAATCAGATAGTTTCACCGACCAAGGTAGTGGCGCCAACTTCACCTGCAACAATAAGATTATCGGGGCACGAGTTTATAAACCTCCCACAAATGTTACCAATGATGATGACAACACTGCAAGAGACATTAGGGGTCATGGAACCCATACTGCCTCAACGGCAGCTGGAAACACTATCAGTGGTGCAAGCTACTATGGACTCGCAAGAGGCACCGCAAGAGGTGCAGTCCCATCTGCAAGGATTGCAACATACAAAGTTTGCTATAAACTAGGCTGCAACGATGCTAATGTTTTAGCAGCTTTCGATGATGCCATCGCTGATGGAGTCGACATCATTAGCATCTCACTCGGAGGTGACAAAGCCGTTGACTTAGTGAAGGACCCTATCGCAATTGGTTCCTTCCATGCCATGGAGAGAGGAATTCTCACAGTGCAGTCTGCAGGGAACTCTGGTCCTGCTTCAGGCTCTATTTGTAGCGTGGCGCCGTGGTTGTTGACTGTCGCAGCTAGCACCATAGATCGCCAATTCATTGACAAGGTGATTCTTGGGAATGAGATGACATTGATTGGAAGGTCTGTTAATGGCGTCGTTTCAAATGGGACAAAATTTCCTATTGTTAAGCAGAATGCTAGTGATGATAAATGCAAAAAGTTCTCTGATGTGTGTGAATGTTTAGGACGTGAGCAGGTGAAGGGGAAAATTGTTTTATGTGGAGGAATCGCGAAAGATATAGCGGCTTTTGATAATGGTGCAGTTGGTTCAATCACGACGGATATAAATTTCCCAGACAATGATGTGTTGTCTCTGGTGACTTATTTGCCTTCAATGAACCTGAATTCGAAAGACTATGCTATTGTCCAAAACTACACAAATTCTGCAAACAATCCTGAAGCTGAGATATTGAAGAGCGAGATATCTGAAGACCGTAGTGCTCCAAAAGTTATTTTTTTCTCTTCTCGTGGGCCAAATCCCTTGATTCCAGAGATTTTGAAACCAGACGTGAGTGCCCCCGGTGTGGATATCTTGGCTGCGTGGTCACCTGAAGCGACACCCTCAGAATATTCAAGTGATAAGAGAAAGGTCAATTACAATGTATTGTATGGTACATCAATGGCATGTCCTCATGTTGCTGGAGTAGCCGCATATTTGAAATCATTTCACCCAAATTGGTCACGGGCGGCTATTAAATCCGCAATCATGACCACTGCGGATCCCTTCAATGGGAATTATAATCTGACTGGTGAGTTCTCTTATGGAGCTGGGAATGTCAATCCAGTAAAAGCTACTAACCCTGGGCTTGTATATGACATTTCTAAAAAAGACTATGTCAAAATGCTTTGCAACTATGGTTATAGTGCTAAGAAAGTTAAGATTATTGCTGGAGCTCATTCAGCTAGTTGTCATGGAGTAGCACACGATAGAACCTTGGTGAAAGATTTAAACTACCCTGCAATAACGGTAAACGTTGAGCCTTTGGAGCCTTACATTATCAAGTTTAATAGAATAGTGACGAATGTTGGCTTTCCTCACAACTCGACCTACAAGGCTATTGTCTCGCCGAATCCGAAAATGAATATCACGGTGGAGCCTAAGGTTTTGAGGTTCAAATCGTTGCATGAGAAACATTCTTTTGTTGTCACTGTTGCTGGAGGAGGATTGCAAAGAGGTAGTGCCGTTTCCTCATCACTAGTGTGGTCAGATGGCAAGCATAATGTGAAGAGTCCAATTATTGTGTTTGTCTCTTAG 2202 0.4314 MVKHSFLLVFLLASVLAPTIPFFCHASNDDGDHKLYIVYMGSLPVQRGSSNYYSPTSHHVSMLQQVVGESDVTKHHVRSYKRSFNGFAAKLSEKQREMIAAMDGVVSVFPSKTLQIQTTRSWDFVGLHESVKRQKKEESDLVIGLIDTGIWPESDSFTDQGSGANFTCNNKIIGARVYKPPTNVTNDDDNTARDIRGHGTHTASTAAGNTISGASYYGLARGTARGAVPSARIATYKVCYKLGCNDANVLAAFDDAIADGVDIISISLGGDKAVDLVKDPIAIGSFHAMERGILTVQSAGNSGPASGSICSVAPWLLTVAASTIDRQFIDKVILGNEMTLIGRSVNGVVSNGTKFPIVKQNASDDKCKKFSDVCECLGREQVKGKIVLCGGIAKDIAAFDNGAVGSITTDINFPDNDVLSLVTYLPSMNLNSKDYAIVQNYTNSANNPEAEILKSEISEDRSAPKVIFFSSRGPNPLIPEILKPDVSAPGVDILAAWSPEATPSEYSSDKRKVNYNVLYGTSMACPHVAGVAAYLKSFHPNWSRAAIKSAIMTTADPFNGNYNLTGEFSYGAGNVNPVKATNPGLVYDISKKDYVKMLCNYGYSAKKVKIIAGAHSASCHGVAHDRTLVKDLNYPAITVNVEPLEPYIIKFNRIVTNVGFPHNSTYKAIVSPNPKMNITVEPKVLRFKSLHEKHSFVVTVAGGGLQRGSAVSSSLVWSDGKHNVKSPIIVFVS* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4612 733 Gene3D - 598 732 - -
Lja3g4612 733 CDD PA_subtilisin_like 332 452 - -
Lja3g4612 733 SUPERFAMILY Subtilisin-like 117 585 IPR036852 GO:0004252|GO:0006508
Lja3g4612 733 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 35 731 - -
Lja3g4612 733 Pfam Peptidase inhibitor I9 36 116 IPR010259 -
Lja3g4612 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 117 IPR037045 -
Lja3g4612 733 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lja3g4612 733 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Lja3g4612 733 PRINTS Subtilisin serine protease family (S8) signature 194 207 IPR015500 -
Lja3g4612 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 731 IPR045051 -
Lja3g4612 733 Pfam Fibronectin type-III domain 631 730 IPR041469 -
Lja3g4612 733 Gene3D - 325 459 - -
Lja3g4612 733 ProSiteProfiles Serine proteases, subtilase domain profile. 121 581 - -
Lja3g4612 733 Gene3D Peptidase S8/S53 domain 140 594 IPR036852 GO:0004252|GO:0006508
Lja3g4612 733 CDD Peptidases_S8_3 114 556 IPR034197 -
Lja3g4612 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 520 530 IPR023828 -
Lja3g4612 733 Pfam Subtilase family 139 559 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4612 Lja-Chr3 88078323 88102061 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4612 40 731 Subtilisin-like Serine Gene Family AT5G59190 53.586 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4612 - - lja:Lj3g3v0549610.1 1005.74