Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4582 ATGTATGGGTCAAATGAGGCCCAGTTACTACTACAGTTTGATGCTGAAGCTACACCCCTTATAAGCCATTTTATCAGAAACCCTCAACCTCTCGAAACGCTTAGCAGCCGCGCCTCCAATCTTCCATCTTCGCCTGCCAAAATGACCAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATACGGCACCCGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAGGTCAGTCAGCACAGCAAGTTCTTCTGTGAGTTCTGTGGAAAGTATGCTGTTAAGAGAAAGGCTGTGGGCATTTGGGGCTGCAAAGATTGTGGAAAGGTCAAGGCTGGGGGTGCTTATACATTGAATACTGCCAGTGCTGTGACTGTCCGGAGTACTATCAGGAGGCTGAGAGAGCAGACTGAGGGTTGA 420 0.481 MYGSNEAQLLLQFDAEATPLISHFIRNPQPLETLSSRASNLPSSPAKMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4582 139 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 43 139 - -
Lja3g4582 139 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 51 119 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lja3g4582 139 TIGRFAM eL43_euk_arch: ribosomal protein eL43 48 138 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lja3g4582 139 PANTHER ZGC:171772 43 139 - -
Lja3g4582 139 Pfam Ribosomal L37ae protein family 51 135 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lja3g4582 139 SUPERFAMILY Zn-binding ribosomal proteins 57 129 IPR011332 GO:0006412
Lja3g4582 139 Gene3D - 48 139 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4582 Lja-Chr3 87670380 87672055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4582 48 139 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 92.391 2.64e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4582 K02921 - csin:114301577 190.66