Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4579 ATGAATGCAGTGCAAGTTTTTCTGGGAGCAATTTTGGTGGTGTTGGTATATCTTTTCAATGTTATGGTGTTGAGGCCAAGATCACTGAGAGCAAAGCTTCACAGGCAAGGGATTCATGGTCCTTCTCCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGACAATTTTACTCCAATCTCACTCAACACAAGGCAAAGACAAAGACAAAGACAGGGATATTGTATCTGTTTCTCACAACTTGACTTCCACTCTATTCCCTCACATTCAAAAGTGGAGAAACCAATATGGTCCCATGTACTTGTTTTCTTCAGGGAGTATTCAGTGGTTATTGGTGTCAGATTTAGAGATGGTAAAGGAAATCCTCATGAACACCTCTTTAGATCTAGGGAAGCCTTCTTATCTGTCCAAGGATATGGGGCCACTCTTAGGAGAAGGTATATTGTCTTCAAGTGGAACAATTTGGGCTCATCAGAGGAAGATAATTGCCCCTGAACTTTACCTAGACAAGGTGAAGGCAATGGTTAATCTGATAGTTGACTCCACAAATACAAAACTAAGATCTTGGGAGGCTAGACTAGAAAGTAAGGGAGTGGTTTCAGAGATTAGAGTTGATGAAGATCTGCGTAGCTTGTCGGCCGACATAATCGCAAGAACTTGTTTTGGGAGCAACTATACTGAAGGAAAAGAAATATTCACAATGCTTAGAGATCTTCAAAAAATCCTTTCCAATAAGCATGCCGGAATTCCAGGCTTTAGATACTTGCCAAACAAAAGCAACAGACAGATGTGGAAATTAGAGAAAGAGATAAACTCAAAGATATCAAAGCTTATAAAACAACGCCAGGAGGAAACTCATGATGAGCAGGACCTCTTACAAATGATACTTGAGGGTGCAAAGAATTATGAGGTCAGTGATGGCCTCTTATCAAATTCTGTCTCGCGTGAAAGGTTTATGGTAGATAACTGCAAAAACATATTCTTTGCTGGACATGAGACTACTGCAACTACAGCATCATGGTGCTTAATGCTTCTAGCTTCAAACCAAGATTGGCAAGATCTTGCCCGTGCTGAGGTGCTTGAAGTTTGTGGAAATGGTGATCCTGATGCAAGCATGCTTAGAAATATGAAAACGTCTATAAAAATGTTGCACCTGCATCTAACCATGGTGATTCAAGAGACCCTGAGGCTTTATCCACCAGCAGTATTTGTCATTAGAACAGCTCTCAAGGACATAAATTTAAAAGGTATCCTAATTCCGAAAGGAATGAACATTCAGATTCCAATCCCAGTTCTGCAGCAAGATCCTCAGCTCTGGGGACCTGATGCCTACAAATTCAACCCAGAAAGATTTGCAAATGGGGTGCTGGGCGCCTGCAAGAGTCCACTAGCTTACATGCCATTCGGACTAGGTGCTCGTGTATGCGCGGGGCAACATTTAGCCATGGCAGAACTGAAGGTAATTCTGTCTCTCATTCTGCTGAAGTTTCGGTTCTCCCTCTCATCGAGTTACAGCCATTCGCCTGCATTCCGCTTGGTTGTACAACCTGGCCAGGGAGTTGTTCTTAAAATGTCAAAAATTTAA 1584 0.4198 MNAVQVFLGAILVVLVYLFNVMVLRPRSLRAKLHRQGIHGPSPHFYFGNIPEMKTILLQSHSTQGKDKDKDRDIVSVSHNLTSTLFPHIQKWRNQYGPMYLFSSGSIQWLLVSDLEMVKEILMNTSLDLGKPSYLSKDMGPLLGEGILSSSGTIWAHQRKIIAPELYLDKVKAMVNLIVDSTNTKLRSWEARLESKGVVSEIRVDEDLRSLSADIIARTCFGSNYTEGKEIFTMLRDLQKILSNKHAGIPGFRYLPNKSNRQMWKLEKEINSKISKLIKQRQEETHDEQDLLQMILEGAKNYEVSDGLLSNSVSRERFMVDNCKNIFFAGHETTATTASWCLMLLASNQDWQDLARAEVLEVCGNGDPDASMLRNMKTSIKMLHLHLTMVIQETLRLYPPAVFVIRTALKDINLKGILIPKGMNIQIPIPVLQQDPQLWGPDAYKFNPERFANGVLGACKSPLAYMPFGLGARVCAGQHLAMAELKVILSLILLKFRFSLSSSYSHSPAFRLVVQPGQGVVLKMSKI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4579 527 SUPERFAMILY Cytochrome P450 81 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 522 - -
Lja3g4579 527 Gene3D Cytochrome P450 27 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS P450 superfamily signature 466 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PRINTS P450 superfamily signature 475 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 522 - -
Lja3g4579 527 Pfam Cytochrome P450 86 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja3g4579 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4579 Lja-Chr3 87650931 87654241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4579 117 524 Cytochrome P450 AT5G24900 46.763 7.00e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4579 K24544 - gmx:100780335 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4579 3 87650931 87654241 Lja3g4579 3 87650931 87654241 ECH