Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4573 ATGTCCTTCAATCAATCAAAGTCCGACAGGAACGACGCCGCCGCTTACCGAAAATCCGGGCGATCCGCGAGCTTCAATCAGCCGAGAGGTTCATCAGGCGCCCATGGAAAGAGTGGCGGTGGAGGCGGTGGTACTGGATACGCGCCGGCGAACACCTCTGCTTCTTCACTCTCCTCATCCCGGAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGGCAAGCTAGGGTAAACCCATCCCCAGTGAACGCAACAGAGTCTAATAATGCTTCTGCTGCTCGGATCACACCTAATGGTACCCATGTACAGCCACAATTACATGGAGCATCTGATGGGCCAGTTACGAAGTCGTCTGAATCATCAGCTGCACAGAGAAGTTCTAGAGTTGTTTCTAAAGCTCCAACTTCTCAAAAGTCCACCATGAGTTCTGATACAGCTGCTCCTCCCAGCACTGCTAAGGGAGGAGATGCATCTAGTGTGTTCCCTGTTCAATTTGGATCAATTATTCCTGCTGTTGCGAATGTGATGGCAATTCCTGCTCGGACAAGCTCAGCTCCTCCCAATTTAGATGAGCAAAGGTGTGATCAAGCTCGTCATGAGTCTTATAGATCTGCGGTTTCAATGCCAGTACCTCCTGTTCCAAAGCAGCAGCAACCACCTAGGAAAGATGCAGGTGTCACTGAACAATCTAATGCCGGGGAGCCTTATATGGGGACAAAATTTAAACAGGATCCTCAGGTGTCAGCTTTGACCCCATTAAACCAGATGCAGAAGCCTTCTGTTCCTGCCTCTGGGATTTCAGTTTCGGTGCCATATCACCAGTCACAGGTACCTTTACAGTTTGGTGGTCCTAATCCACAGATTCCAACTCAGAGTTTGTCAACGGCACCCCTTCAGATGCCCATACCGTTGCCTTTACCAATTGGAAATGCTGCACAAGTGCAACAGCCAGTTTTTGTTCAGGGTCTTCAGCCTCATCCGATGCATCCTCAGGGGATTATGCATCAAAGCCAAAACATGAGTTTCATTCCCCATCAGTTGTCCCATCAATTAGGCAACATGGGCATTGGCATCGGCCACCAATATTCCCAGCTACATGGAGGAAAATTTCCTGGTCCTCGAAAACCTGCTTCTGTGAAGATAACTCATCCTGATACGCACCAAGAGCTGAAGCTTGAAAAACGGGAAGATGCTTATTCAGATGGTGGATCTTCTGGGGCTAGGTCACATCCTAATGTACCTTCTCAATCCCAACCTGTTAAATCTTTTAGTGCTTCTCATTCTATGAACTATTATCCACCCAGCACATATAATACCAGCTCTCACTACTATCCACCACATAGTTCTCTCCCATTAACCAATAGCCTGATAACTCCTAATTCTCAGCCACCGATACTTAACTATCCTGTGAACCATGGTCCACAAAATGTGGGTTTCATTAATTCACCATCACTGCTTGTTGGCAAAGCTAGCACCCCTATTCCTGGCATTGTCGAACCAACTACTGTAAACTTTTCCCGTGATGTGCCTCATATGTCAGGGGTTGCTTCTGTGACTATTAAATCAAGTGGCATGCCTCCTGTTGTAGACTCGTCATCGGCCAAATCCAGTTTTTCTGATGTTCAAAATAGAGAACCTCCTGGTTCATCATTAAATTGTGATGCTGGCTCCTCTGTGCCACAAAAAGAGTCTGAAATTTTGAATACCTCTCCACAACAATCAAATTATTCCAGTGACTCTTCTGTTTTGAGTTCATTGCCTAAACAATCCACGGCATCTGTTCCTATAACTACTGAGAAGCTTGCTGTCACTCCCTCGATGCTTCCTGCATCTGGTGTGAGCGAGGATTCTATCTCAGTTGTGTCTAACCATGAACAGAGAAAAGAATCTCTTAGCAGGTCTAACTCGTTAAAGGATAATCAGAAGAAACCAGGGAAGAAAGGGCAATCTTCACAACATCAGGTTTCTGTGCAATCTCCTGCATTGGATGGTGTACCTTCTCAAGCTGTTGACAGTGGTATATCTGATACTGGAGTTTCTGAATCTGTCGGAACTAAAACAAATGATTCCCTGGGAATTCCCTCTGAAGATCCTCCTATATCTGACACATTATCTGGTAGCATATCTGGTGTTATTGAAGCGAAGACCAATGGGTCTGGAGAAGCTTCGGCTTGTGTTTCAGGTGAAGGATCTGGTGCTCTAGCTTCTGATAGTTTGAACAACCATAAGCAGGATAAAATAGATGAATCATCCGAAGATCTGCAGTGTGCTGATCTCCCAGAAAATTCTTCAAAGGATGTCAATGATAGTTCAGGTAATTCTGGTGGTGACTCAATGTCTCTTTCAGTGTCAGGGACAAAGGATAGACCAAATTTAGAACCAAACAGGGTGAAAGCTACATCTAAAGGGAAGAAAAAAAGAAGAGAGATTCTTCAGAAAGCAGATGCTGCTGGGTCAACTTCTGATCTTTATAATGCGTACAAGGGACCTGAGGAAAAGAAAGAAACTGTCTTTATTTCACAGAGCACAGAAGGTGCTTCTATTTCTGAAAATTTAAAGCAATTTCCTGAAGAAGCTACTCAGTCAGATGCTAAATCAAGTGAGAAGCACAGTCACATTAAAGCTGAACCTGATGACTGGGAGGATGCTGCTGACATGTCTACACCGAAGCTGAAAGTTGATGAAAATTCTCCTCAAGTTAGTGATGGTACAGCGAAAAAGTACTCTCGCGATTTCCTCTTGAAATTTGCAGAGCAATGCACGGACCTTCCTGAAGGTTTTGAAATCACAGCAGACATAGCTGAGGCTTTGGTGAGTGCTAATAGGAATAGTTTTCATGTTATTGAGCGTGATTCGCATCCTAGTCCTGGAAGAATTGTAGATAGGCCAGGTGGGATGTCTCGGACGGAACGTCGTGGGAATGTTGCGAATGAGGACGACAGATGGAGCAAAGTTTCTAATGCTTTTCATTCTGGACGTGGTTTGGATGGAAGTGGAGGTAATGCAGGATTTCGGTCTGGCCAAGGAGGGGGGGTTTTAAGGAATCCCCGTGCACAGGGATCCATGCAATATGCTGGGGGTGTCCTTTCTGGGCCAATGCATTCTGCAGGAAATCAGGGTGGAATGCAAAGAAATAGCCCAGATGGGGAGAGGTGGCAGCGTGCCCCTAGCTTCCAGCAAAGGGGTTTAATTCCTTCTCCTACTTCTCAAACTCCCTTACAGATGATGCACAGAGCTGAGAAGAAATATGAAGTGGGTAAAGTCTCGGACACAGAAGAGGTGAAGCAGAGGCAGTTGAAGGGTATCTTGAACAAACTAACTCCTCAGAATTTTGATCGACTCTTTGAACAGGTGAAAGCAGTTAATATTGACAATGCAATCACTCTCACTGGTGTCATCTCACAAATCTTTGAGAAGGCTCTGATGGAGCCAACCTTCTGTGAAATGTATGCCAACTTCTGTTCACATCTGGCTTCTGAGTTACCTGATTTTAGTGAGAACAATGAAAAAATAACTTTTAAAAGGTTATTGTTAAACAAGTGCCAGGAGGAATTTGAGAGAGGTGAAAGAGAACAAGAAGAAGCAAATAAGGTTGAGGAGGATGGCATCAAGCAGTCTGATGAAGAAAGAGAAGCAAAAAGAGTAAAGGCAAGAAGGCGCATGTTAGGTAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACAGAGAGAATTATGCATGAGTGTATCAAGAAGTTACTGGGTCAGTATCAGGATCCTGATGAGGAAGATGTTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCGAAAGCCAAGGAACATATGGATGCATACTTCGAAAGGATGAAAATATTTTCAAACAACATAAATTTATCTTCTAGGGTGAGGTTTATGTTGAAGGATGCCATTGATTTGAGGAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTACACAGAGATGCTGCACAAGAGAGGCATGCTCAAGCTGGTAGGCTGGGTCGTGGTGTGGGCAATATTCAGTCAGTAAGAAGGAACCCTATGGATTATAGTCCAAGAGGATCATCTATGTTGTCTTCTCCCAATGCACAGATGGGGGGACTGCGTGGGCTGCCTACTCAAGCTCGTGGATATGGTTCTCAGGATGCCCGTTTTGAGGAAAGACAATCTTATGAGGCTAGGACATTGTCAGTTGCTTCACAAAGACCCTTAGGTGATGATTCTTTATTTGTACCCCAAGGTGGTCTTGGTAAGGTAATGTCCAGTAGAGGATCACCTGCTATTTCTAATTTGCCAACATCTGATGTGCACTCTGGCTCTGGAGACTCGCATAGAACAAGTACTGGTCTAAATGGTCCTAATAATTTATCAGAGCGCACAGCATATAGCCCAAGGGTGGATCTTGCGTCAAGAGACGGGAGAAATGCTGATCGGAATCTTGACAGACCTGTTCCGACTTCACCTCCTGCTCAATTGCAAGGGACATTAGTTTCCCAGAATGCTTCTTCTGATTCTGAGGCTTTTCCAGAACGACTGCAGGGCTTGTCCTTGTCTGCAATCAGAGAATACTACAGTGCTAGGGACGGGAATGAAGTTGCTCTATGTGTTAAAGATTTGAATTCTCCAAGCTTTCATCCTTCAATGGTTTCTCTCTGGGTCATAGACTCCTTTGAGAGAAAGGACACGGAACGAGATCTTTTGGCAAAACTGCTTGTCAACCTTGTGAAATCTCAGAATGGCACCTTGAATCAAGCTCAACTTGTCAAAGGGTTTGAATCTGCTCTCCGTACATTGGAGGATGCTGTTAATGATGCCCCGAAAGCACCAGAGTTTCTTGGCCGAATTTTCGCCAAAGTGATAACAGAGAGTGTAGTCTCTTTGAATGAGATTGGGCAGTTAATACATGATGGTGGAGAGGAGCCAGAAAGTCTCTTACAAGTTGGACTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGCTATAAGATTAGAGAAAGGGGACGCGGTTCTAAGTGAGATCCGTACAAGCTCTAACTTGCAGCTGGAGACTTTCCGGCCACCGAAACCTATTACATCGAGGAAGTTGGAGGCATTTATTTAG 5148 0.4468 MSFNQSKSDRNDAAAYRKSGRSASFNQPRGSSGAHGKSGGGGGGTGYAPANTSASSLSSSRSFNKKSNNAQGGQARVNPSPVNATESNNASAARITPNGTHVQPQLHGASDGPVTKSSESSAAQRSSRVVSKAPTSQKSTMSSDTAAPPSTAKGGDASSVFPVQFGSIIPAVANVMAIPARTSSAPPNLDEQRCDQARHESYRSAVSMPVPPVPKQQQPPRKDAGVTEQSNAGEPYMGTKFKQDPQVSALTPLNQMQKPSVPASGISVSVPYHQSQVPLQFGGPNPQIPTQSLSTAPLQMPIPLPLPIGNAAQVQQPVFVQGLQPHPMHPQGIMHQSQNMSFIPHQLSHQLGNMGIGIGHQYSQLHGGKFPGPRKPASVKITHPDTHQELKLEKREDAYSDGGSSGARSHPNVPSQSQPVKSFSASHSMNYYPPSTYNTSSHYYPPHSSLPLTNSLITPNSQPPILNYPVNHGPQNVGFINSPSLLVGKASTPIPGIVEPTTVNFSRDVPHMSGVASVTIKSSGMPPVVDSSSAKSSFSDVQNREPPGSSLNCDAGSSVPQKESEILNTSPQQSNYSSDSSVLSSLPKQSTASVPITTEKLAVTPSMLPASGVSEDSISVVSNHEQRKESLSRSNSLKDNQKKPGKKGQSSQHQVSVQSPALDGVPSQAVDSGISDTGVSESVGTKTNDSLGIPSEDPPISDTLSGSISGVIEAKTNGSGEASACVSGEGSGALASDSLNNHKQDKIDESSEDLQCADLPENSSKDVNDSSGNSGGDSMSLSVSGTKDRPNLEPNRVKATSKGKKKRREILQKADAAGSTSDLYNAYKGPEEKKETVFISQSTEGASISENLKQFPEEATQSDAKSSEKHSHIKAEPDDWEDAADMSTPKLKVDENSPQVSDGTAKKYSRDFLLKFAEQCTDLPEGFEITADIAEALVSANRNSFHVIERDSHPSPGRIVDRPGGMSRTERRGNVANEDDRWSKVSNAFHSGRGLDGSGGNAGFRSGQGGGVLRNPRAQGSMQYAGGVLSGPMHSAGNQGGMQRNSPDGERWQRAPSFQQRGLIPSPTSQTPLQMMHRAEKKYEVGKVSDTEEVKQRQLKGILNKLTPQNFDRLFEQVKAVNIDNAITLTGVISQIFEKALMEPTFCEMYANFCSHLASELPDFSENNEKITFKRLLLNKCQEEFERGEREQEEANKVEEDGIKQSDEEREAKRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDVEALCKLMSTIGEMIDHPKAKEHMDAYFERMKIFSNNINLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERHAQAGRLGRGVGNIQSVRRNPMDYSPRGSSMLSSPNAQMGGLRGLPTQARGYGSQDARFEERQSYEARTLSVASQRPLGDDSLFVPQGGLGKVMSSRGSPAISNLPTSDVHSGSGDSHRTSTGLNGPNNLSERTAYSPRVDLASRDGRNADRNLDRPVPTSPPAQLQGTLVSQNASSDSEAFPERLQGLSLSAIREYYSARDGNEVALCVKDLNSPSFHPSMVSLWVIDSFERKDTERDLLAKLLVNLVKSQNGTLNQAQLVKGFESALRTLEDAVNDAPKAPEFLGRIFAKVITESVVSLNEIGQLIHDGGEEPESLLQVGLAADVLGSTLEAIRLEKGDAVLSEIRTSSNLQLETFRPPKPITSRKLEAFI* 1716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4573 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 124 1705 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 856 882 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 756 789 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 862 882 - -
Lja3g4573 1715 ProSiteProfiles MI domain profile. 1527 1651 IPR003891 -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1188 1211 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 385 401 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 647 724 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 48 149 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1502 1523 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1360 1383 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1036 1070 - -
Lja3g4573 1715 SUPERFAMILY ARM repeat 1091 1320 IPR016024 -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 385 426 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 964 978 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1 160 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1339 1523 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 621 646 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 1439 1477 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 948 978 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 521 593 - -
Lja3g4573 1715 Gene3D - 1096 1331 - -
Lja3g4573 1715 Coils Coil 1178 1198 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 405 426 - -
Lja3g4573 1715 SUPERFAMILY ARM repeat 1525 1705 IPR016024 -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 608 828 - -
Lja3g4573 1715 Pfam MIF4G domain 1096 1318 IPR003890 GO:0003723|GO:0005515
Lja3g4573 1715 Gene3D - 1523 1715 - -
Lja3g4573 1715 MobiDBLite consensus disorder prediction 992 1070 - -
Lja3g4573 1715 SMART ma3_7 1528 1642 IPR003891 -
Lja3g4573 1715 SMART if4_15 1096 1318 IPR003890 GO:0003723|GO:0005515
Lja3g4573 1715 Pfam MA3 domain 1534 1640 IPR003891 -
Lja3g4573 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 124 1705 IPR045208 GO:0003743
Lja3g4573 1715 MobiDBLite consensus disorder prediction 182 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4573 Lja-Chr3 87600033 87621104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4573 1 1714 Eukaryotic Initiation Factors Gene Family AT3G60240 45.850 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4573 K03260 - gmx:100819084 2180.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4573 3 87600033 87621104 Lja3g4573 3 87600033 87621104 ECH