Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4569 ATGTTCCGCCGCGCAACATCATCCCTCGTGGCTCGCGCCGCCGCCAACACCCGCAGATTCTCCACCGATGTGGGTGCTCCCGCCGCCGCCGGCTCCAACTTCGAGGATGCGTGGAAGAAAGTCAGCCCTAACGTCGACCCACCCAAGACCCCTCTCGAGTTCATGAAGCCGCGCCCTCCTACTCCGAACACTCTCCCTACCAAGCTCACCGTCAACTTCGTGCTTCCTTACTCTTCCCAATTGTCTTCCAAAGAGGTTGATATGGTCATAGTACCAGCGACAACTGGGCAGATGGGTGTTCTCCCAGGACACGTAGCAACAATTGCAGAGTTGAAACCCGGGCTCCTTTCTGTACATGAAGGAAATGATGTGACCAAGTATTTTGTCAGCAGCGGCTTCGCCTTCGTCCATGCAAACTCTGTTGCTGATATAATAGCTGTTGAGGCTGTGCCACTCGATCGAATTGATCCAAACCTAGTCCAGAAGGGTCTTCAAGATTTCACTCAGAAGCTCAACTCAGCCTCAACTGATTTGGAGAAGGCTGAAGCTCAGATTGGAGTTGATGTGCACAGCGCTCTCAACTCTGCACTTACAGGCTAA 600 0.5317 MFRRATSSLVARAAANTRRFSTDVGAPAAAGSNFEDAWKKVSPNVDPPKTPLEFMKPRPPTPNTLPTKLTVNFVLPYSSQLSSKEVDMVIVPATTGQMGVLPGHVATIAELKPGLLSVHEGNDVTKYFVSSGFAFVHANSVADIIAVEAVPLDRIDPNLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4569 199 CDD F1-ATPase_delta 69 192 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja3g4569 199 Gene3D - 59 155 IPR036771 -
Lja3g4569 199 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 69 150 IPR036771 -
Lja3g4569 199 Coils Coil 164 184 - -
Lja3g4569 199 Gene3D - 156 198 - -
Lja3g4569 199 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 199 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja3g4569 199 Hamap ATP synthase epsilon chain [atpC]. 67 187 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja3g4569 199 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 69 141 IPR020546 GO:0015986
Lja3g4569 199 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 79 184 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lja3g4569 199 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 199 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4569 1 199 Primary Pumps ATPases AT5G47030 69.903 2.94e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4569 K02134 - gmx:100780778 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4569 3 87555201 87558654 Lja3g4569 3 87555201 87558654 ECH