Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4533 ATGTTTGGGGAATCAGGAAAGTGGGTGATACTGATAGCATCAATTTGGATACAAGCATTCACTGGGACAAACTTTGACTTCTCATCCTACTCATCTGATCTCAAGTCTGTTCTTCAAATAACTCAGCTTCAGCTCAATTATCTCTCTGTGGCTTCAGACATGGGAAAGGCATTTGGGTGGTGTTCTGGGCTCTCACTCATGTATTTGCCATTGTGGGTGGTCTTGTTCATGGCTACTTTCTTGGGGTTTTTTGGTTATGGCATCCAATGGCTTGTCATCCAAAGACTCATCACCTTGCCTTATATTCTGGTCTTTTTTCTATGCTTAGTTGCTGGATGCAGCATCTGCTGGTTCAACACCATCTGCTATGTCTTATGCATCAGACACTTCACAGCTAACCGTTCACTTGCATTATCACTGAGCATCAGTTTCAACGGTGTGAGTGCAGCTTTATACACTCTCATTGCTAATGCAATAACCTCCAATGATGACAATCTCTATCTACTGCTCAATGCCCTTGTTCCTGTCCTCATTTCCTTTATGGCACTCATCCCTATTCTTCACCAACCACAGCCTCAGTCAGATTCTGCGGACACGCTTCGGCGCGATACCTCGGTCTTTCTCTGCCTCAACATCCTTGCACTCATCACAGGCCTCTACCTCCTCTTACTCTATTCCCTCTCTTCTACCCCGGCATTAGCTCGTGTGATCCTCGCAGGTGCTGTTTTTCTCCTTGCACTTCTCTTGTTCTTGCCTCAAATTGTGCATTCTAGAGAATGGTCTTGCTTCACTGTCCCCACAACAAGCTTTTCTTTATATGATTCAAGTTTCACTCTTGTTGATGAACATTATGATGAGATTCACAAAGAACTCATTAGTGTTCATGAGGATAGTACTGCAAGGAATGGAAGTTCACAAGGCATCATGAGAGGAGGGAAGAAGTGTTGGTTTGTGAGTGTGTTGGATAGAGAGCAGATTACAGTGCTTGGGGAAGAGCATTCAACTAGGTTGCTGTTAAGTAGATGGGATTTCTGGCTATATTACATGGCATATTTCTGTGGAGGGACAATTGGGTTGGTTTATAGCAACAACTTGGGGCAAATTGCACAGTCACTTGGACACAATTCTCAGACTAGTTCCCTTGTTACACTCTACTCCACATGTTCCTTCTTTGGTCGCCTTCTTGCAGCCGCACCTGACTTCCTCAGCGGAAAGATACACTTTGCAAGAACTGGATGGTTTGCAGCAGCCCTGGTGCCAACACCCATTGCATTCATTTTACTGGCTATATCTGGCAGTGGAGCAGCATTGCACATAGGCACCAGCTTGATTGGGCTGAGTTCTGGCTTTGTTTTCTCTGCAGCAGTATCAATTACATCAGAGTTATTTGGTCCAAACAGTGTTAGTGTGAACCACAACATCCTCATCACCAACATCCCTTTAGGCTCATGCCTTTATGGCCTTCTTGCAGCATTGATTTATGACTCCAATGCAGTAATGAGCTCAAGTCATGAAATTATTTCGCTGCGTGAAATGTCCATGTGCATGGGGAGAAAGTGCTACCTGCAGACATTTATATGGTGGGCTTGTATTTCAATGGTGGGATTGGTTTCAAGCTTCTTGCTTTTCATAAGGACTAGGCAGGCTTATGACAATTTTGAAAGAAATAAAAACAGAAACAGAACACAGACCACTTAG 1698 0.4399 MFGESGKWVILIASIWIQAFTGTNFDFSSYSSDLKSVLQITQLQLNYLSVASDMGKAFGWCSGLSLMYLPLWVVLFMATFLGFFGYGIQWLVIQRLITLPYILVFFLCLVAGCSICWFNTICYVLCIRHFTANRSLALSLSISFNGVSAALYTLIANAITSNDDNLYLLLNALVPVLISFMALIPILHQPQPQSDSADTLRRDTSVFLCLNILALITGLYLLLLYSLSSTPALARVILAGAVFLLALLLFLPQIVHSREWSCFTVPTTSFSLYDSSFTLVDEHYDEIHKELISVHEDSTARNGSSQGIMRGGKKCWFVSVLDREQITVLGEEHSTRLLLSRWDFWLYYMAYFCGGTIGLVYSNNLGQIAQSLGHNSQTSSLVTLYSTCSFFGRLLAAAPDFLSGKIHFARTGWFAAALVPTPIAFILLAISGSGAALHIGTSLIGLSSGFVFSAAVSITSELFGPNSVSVNHNILITNIPLGSCLYGLLAALIYDSNAVMSSSHEIISLREMSMCMGRKCYLQTFIWWACISMVGLVSSFLLFIRTRQAYDNFERNKNRNRTQTT* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4533 565 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 558 - -
Lja3g4533 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 558 - -
Lja3g4533 565 Gene3D MFS general substrate transporter like domains 316 538 IPR036259 -
Lja3g4533 565 SUPERFAMILY MFS general substrate transporter 208 548 IPR036259 -
Lja3g4533 565 Pfam Nodulin-like 7 255 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4533 Lja-Chr3 87087937 87093961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4533 1 557 Nodulin-like Gene Family AT1G31470 56.863 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4533 - - gmx:100813947 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4533 3 87087937 87093961 Lja3g4533 3 87087937 87093961 ECH