Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4523 ATGGATCGGGAATGGGGATCGAAACCCGGAAGCGGAGGCGCCGCGACGGCGCAGAACGAAGCCATCGACCGCCGCGAGCGTCTCCGGCGACTGGCCTTGGAAACCATCGACCTCGCCAAGGACCCATACTTCATGCGCAACCACCTTGGCAGCTACGAGTGCAAGCTCTGCCTCACGCTCCACAACAACGAGGGTAACTACCTCGCCCACACGCAGGGGAAGCGCCACCAGACCAATCTCGCTAAGCGCGCCGCGCGTGAGGCCAAAGACGCCCCTGCTCATCCACAACCTCACAAGCGGAAGCTCTCGCTTCGGAAATCTGTGAAGATTGGTCGCCCTGGGTATCGTGTTACCAAGCAATTTGACCATGATACGAAGCAACGATCTCTTCTCTTCCAGATTGAATATCCTGAGATTGAAGAGCTCACCAAGCCAAGGCACCGATTTATGTCTTCCTACGAGCAGAGGGTGCAACCGTTTGATAAAAGATATCAGTATCTCTTATTTGCTGCGGAACCATATGAAATAATTTCTTTCAAGGTACCTAGCACAGAGATTGATAAGTCTACACCAAAGTTTTTCTCGCATTGGGACCCAGACTCAAAGATGTTTACACTGCAATTGTATTTCAAAACCAAGCCACCAGAGGCTAACAAACCACAGCCTGCATCTACTGACAATGGCCCTACAGCTCCTGGGGTTCCACCAAGGCCTTTGCCTCCACCACCACAAGGTGCACTACCACCACCACCACAAGGTGCACTACCACCACCACCACCTCCTCCACAAGGGCTACCTCCTGGTGCACCTATGGGAAATCCTCCTAGAGCCCCTCCACCTCCAATGCCAGGATCTGCACCGCCTCCGCCTCCTATGGCAGCAAACGGTCCTAGACCTGCTCCTCCTGGTGGAATGCCATCTATCCCACCCCCACCTCCTGTTAGTGGCGCATCAGCAGGTTTCAACATGGGTGCTAGACCTCCATTAATGCCACCTCCGCAAGGGTACTAG 1011 0.544 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAHPQPHKRKLSLRKSVKIGRPGYRVTKQFDHDTKQRSLLFQIEYPEIEELTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIISFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASTDNGPTAPGVPPRPLPPPPQGALPPPPQGALPPPPPPPQGLPPGAPMGNPPRAPPPPMPGSAPPPPPMAANGPRPAPPGGMPSIPPPPPVSGASAGFNMGARPPLMPPPQGY* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4523 336 SMART CactinC_cactus_3 89 217 - -
Lja3g4523 336 Gene3D - 94 218 - -
Lja3g4523 336 Pfam Zinc-finger of C2H2 type 52 76 - -
Lja3g4523 336 MobiDBLite consensus disorder prediction 213 336 - -
Lja3g4523 336 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Lja3g4523 336 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g4523 336 Gene3D Classic Zinc Finger 46 89 - -
Lja3g4523 336 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Lja3g4523 336 MobiDBLite consensus disorder prediction 229 316 - -
Lja3g4523 336 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 275 - -
Lja3g4523 336 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Lja3g4523 336 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4523 1 304 C2H2 Transcription Factor Family AT2G32600 70.724 1.99e-131 374