Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4495 ATGGTGATGGTGAAACTTGCAAAGTGGGTTCCCACTGTTTTGGTTTTTATTACATTTTTGGTGAATGGGTCATTTGCCTTGTTCACTCCTAGTGATAATTATTTAATTGCTTGTGGTTCTTCCAAAAGCATCACCTTCCAGGATCGCACTTTTGTTCCTGATTCACAGCATTCTTCAGTGGTGTTGAAAACCACGAATTCGATTGTTGCTAGTTCAAATTCCAGTGTGCCATTGCCAATCCACCAATCAGCTAGGATTTTCACAGAGAAAGCTTCTTATAGATTTCAAGTTGAGGAAGGAAGGCATTGGGTCCGGTTATATTTTTACCCTCTTCCCAACTCTGGTCATAATTTGACTTCGGCTGCTGTAACAGTGGTTTCTGATGAATTTGTTCTCTTGAGCAACTTCACCTTTGGGAACTACAATGGTTCTTATGTGTTCAGGGAGTATGCTATTAATGTTACCTCTGACACATTGACTCTAACTTTCATTCCTCCTACAGGTTCTGTAGCCTTTGTTAATGCAATTGAGGTTGTGTCCATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTTGAACCAACAGCCCCATTCAGTGGCCTTTCAGAACTCGCTTTCGAAACTGTTTACCGCTTAAACATTGGCGGATCCTTGCTCACTGCCCAAAACGACACCCTGGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTGAACAGCTCAGTAGTTAAGGTTTCAATCAACCCTTCCAGCGTTAAGTATCCGGCCGGCGTCACGCCCGAGACAGCGCCAAATTGGGTCTATGCCACTGCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCGAATTTCAACATTACTTGGGTCTTCACTATAGATCCAAACTTCTCCTATTTTATCCGAGTGCACTTTTGTGATATTATCAGCAAGTCACTCAATACTTTAGTGTTCAATGTGTTCATAAACACTGACATAGCTCTTGGAAGCATTGACTTGTCATCTATAACTAATGATTTGTCTGTGCCTTACTATAAGGACTTTGTTTCCAATGCCTCAGCAGACAATACTTTGTCAGTAAGTGTTGGTCCTGATACTATGGCTGACATTACAAATGCCACTTTGAATGGACTTGAGATAATGAAAATCAGCAATGCATTGAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTCCTTCCTAGTTCAGAATCAAACAAGAACATAGGAGTAATAGTTGGTTCTGTTGTTGGAGGTGTAGTTGCCATAGCTTTGGTTGGTTTGTGTTATTGCTGCTTGGCGAGATACAAGTCAAAGTCTCCTGAACAGGGCCATTCATGGCTGCCTTTACCCTTATATGGAAACTCTCAGACCATTACAAAAATGTCAACAACTTCAAACAAGAGCGGAACGGCAAGCTGCATTTCTTTATCTTCATCAAACTTCGGCCGGTTCTTCACTTTCCAAGAAATCCAAGATGCAACCAACAAATTTGATGAGAATTTGATTCTAGGTGTTGGTGGTTTTGGAAGGGTCTATAAGGGGACACTTGAAGATGGAACTTATGTAGCTGTGAAAAGGGGAAACCCGAGATCTGAACAAGGTCTTGCTGAATTCCGAACAGAAATCGAAATGCTATCCAAGCTTCGCCATCGCCATCTTGTTTCTCTCATTGGCTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAATGGACCCCTCAGGAGTCATTTGTATGGAACAGACCTACCATCTCTATCGTGGAAGCAACGGCTGGAAATTTGCATCGGGGCAGCAAGAGGACTTCATTATCTCCACACCGGCGCATCTCAAAGCATAATTCACCGAGATGTGAAGACGACAAACATCCTCTTAGATGATAGCCTTGTTGCTAAAGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGCAGTTTCGGTTATCTCGATCCTGAGTATTTTAGAAGGCAGCAACTTACAGAGAAATCTGATGTTTATTCATTTGGAGTAGTTTTAATGGAAGTGTTGTGCACAAGACCAGCCTTGAACCCTGTCCTTCCTAGGGAGCAAGTTAATATAGCTGAGTGGGCAATGAGCTGGCAGAAGAAAGGGATGCTTGAACAAATCATGGATAAAAATCTGACGGGGAAGGTGAATCCCGCTTCGCTTAAGAAATTTGGGGAGACAGCAGAGAAGTGCCTTGCTGAGTATGGAGTGGATAGACCACCTATGGGAGATGTCTTGTGGAATCTTGAATATGCTCTTCAGCTCCAAGAGACCTCATCAGCACTTATGGAACCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTGACCAGTCTTGAGCCTTTTGATAACAGTATGAGTATGATCGGTGGCGGCGTCTCTGGCACAGATGACGAAGCAGAAGATGCTACTACAAGTGCAGTGTTCTCCCAATTGGTTAATCCACGAGGAAGATGA 2523 0.4304 MVMVKLAKWVPTVLVFITFLVNGSFALFTPSDNYLIACGSSKSITFQDRTFVPDSQHSSVVLKTTNSIVASSNSSVPLPIHQSARIFTEKASYRFQVEEGRHWVRLYFYPLPNSGHNLTSAAVTVVSDEFVLLSNFTFGNYNGSYVFREYAINVTSDTLTLTFIPPTGSVAFVNAIEVVSMPNDLFVDQALALEPTAPFSGLSELAFETVYRLNIGGSLLTAQNDTLGRTWENDQKYLHVNSSVVKVSINPSSVKYPAGVTPETAPNWVYATAEAMGDANVANSNFNITWVFTIDPNFSYFIRVHFCDIISKSLNTLVFNVFINTDIALGSIDLSSITNDLSVPYYKDFVSNASADNTLSVSVGPDTMADITNATLNGLEIMKISNALKSLDGLSSVESLLPSSESNKNIGVIVGSVVGGVVAIALVGLCYCCLARYKSKSPEQGHSWLPLPLYGNSQTITKMSTTSNKSGTASCISLSSSNFGRFFTFQEIQDATNKFDENLILGVGGFGRVYKGTLEDGTYVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPSLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDSLVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLEQIMDKNLTGKVNPASLKKFGETAEKCLAEYGVDRPPMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTSLEPFDNSMSMIGGGVSGTDDEAEDATTSAVFSQLVNPRGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4495 840 Pfam Protein tyrosine and serine/threonine kinase 504 764 IPR001245 GO:0004672|GO:0006468
Lja3g4495 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lja3g4495 840 Gene3D - 205 386 - -
Lja3g4495 840 Gene3D - 33 182 - -
Lja3g4495 840 PANTHER OS07G0166700 PROTEIN 20 833 IPR045272 GO:0004714|GO:0006468
Lja3g4495 840 MobiDBLite consensus disorder prediction 814 840 - -
Lja3g4495 840 Pfam Malectin-like domain 36 384 IPR024788 -
Lja3g4495 840 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 833 - -
Lja3g4495 840 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4495 840 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Lja3g4495 840 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja3g4495 840 SUPERFAMILY Protein kinase-like (PK-like) 476 770 IPR011009 -
Lja3g4495 840 CDD STKc_IRAK 505 770 - -
Lja3g4495 840 Gene3D Transferase(Phosphotransferase) domain 1 575 794 - -
Lja3g4495 840 Gene3D Phosphorylase Kinase; domain 1 457 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4495 Lja-Chr3 86680719 86683949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4495 28 840 Receptor kinase-like Gene Family AT3G46290 52.058 0.0 823
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lja3g4495 Malectin_like 1.3e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4495 - - gmx:100809700 1385.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4495 3 86680719 86683949 Lja3g4495 3 86680719 86683949 ECH